PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0018s0222.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GATA
Protein Properties Length: 314aa    MW: 34259.4 Da    PI: 6.8907
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0018s0222.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.49.6e-19234267134
                 GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                          Cs+C++ kTp+WR gp+g ktLCnaCG+++++ +
  Kaladp0018s0222.2.p 234 CSHCQVQKTPQWRAGPEGAKTLCNACGVRFKSGR 267
                          *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MEYCIEARAL KPSMRREIDV RPNQSLAVDE FVYETEAHGG GFVEDFLIDD LLDFPEKEVV  60
EEEKDSLSGC SAELETDENG NSTVTGEGDF LSQADDAAAG LAVPDDLADL EWVSRFVDDT  120
MPEFPPLYNS RKDKSGVSGR KSSGVGSLPV QLKQPRQIEP LTIPAKPRTK RRRIGRVWSL  180
NSSAASESST ASSSISSSSI ISIPLQFGFR KPLAKKQKTN SEPVQPGDST GRRCSHCQVQ  240
KTPQWRAGPE GAKTLCNACG VRFKSGRLYP EYRPACSPTF RSDVHSNSHR KVLEMRKKKE  300
VGTGGSGLAV QSC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1170174KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.25e-50GATA family protein