PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0018s0130.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-YC
Protein Properties Length: 121aa    MW: 13009.9 Da    PI: 9.7119
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0018s0130.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC1054.8e-331710216100
                NF-YC  16 fknhelPlarikkilk.adedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprde 100
                            +h+lPlarikki+k + edvkmis eaP ++skacelfi elt +sw  a   krrtl+k d+ +av  td+fdflv  v r++
  Kaladp0018s0130.1.p  17 GPRHSLPLARIKKIMKkSGEDVKMISGEAPLVFSKACELFIEELTQKSWKVAVGGKRRTLHKEDVVEAVVGTDVFDFLVALVSRQD 102
                          5589***********73579*************************************************************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    
MRQAGTYSGI LSAAKNGPRH SLPLARIKKI MKKSGEDVKM ISGEAPLVFS KACELFIEEL  60
TQKSWKVAVG GKRRTLHKED VVEAVVGTDV FDFLVALVSR QDTSHSDSGR AGVEDTSHVA  120
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.39e-34NF-YC family protein