PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0018s0054.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 249aa    MW: 27834 Da    PI: 10.3113
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0018s0054.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF931.4e-29959151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         krienk+nrqvtfskRr+g+lKKA+E+SvLCdaeva+iifs++gkl++y++
  Kaladp0018s0054.1.p  9 KRIENKINRQVTFSKRRTGLLKKANEISVLCDAEVALIIFSTKGKLFDYAT 59
                         79***********************************************86 PP
2K-box99.16.4e-33861711297
                K-box  12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                          + + s++ e+a+Lk++i++Lq++q h++GedL+sL+lkeLq+Le+qLe++lk+iR+kK++l++e+i++l+kk k+lq +n++L k+
  Kaladp0018s0054.1.p  86 ESNGSWHLEHARLKARIDTLQKKQSHYMGEDLNSLTLKELQNLENQLENALKHIRAKKSQLMFESISDLKKKDKALQGQNTKLAKQ 171
                          55689******************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MGRGRVQMKR IENKINRQVT FSKRRTGLLK KANEISVLCD AEVALIIFST KGKLFDYATD  60
SCMGRILERY ERYSCAETRL VATDIESNGS WHLEHARLKA RIDTLQKKQS HYMGEDLNSL  120
TLKELQNLEN QLENALKHIR AKKSQLMFES ISDLKKKDKA LQGQNTKLAK QPLQIKEKEK  180
SKGTLMDQQS HAASPASLRA PQICLGPLTV SRGNLYHGAG DGGAASSALH QNSATTFLPR  240
WMLSHLGE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.19e-84MIKC_MADS family protein