PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0016s0327.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 303aa    MW: 32933.4 Da    PI: 6.6339
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0016s0327.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.15e-11123168555
                          HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          h ++ErrRR+++ ++f  L  ++P +     kK +Ka++L  +++Y+++++
  Kaladp0016s0327.1.p 123 HIMAERRRREKLSQRFIALSAIVPGL-----KKTDKASVLGDTIKYLRQME 168
                          999***********************.....9****************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MDVPNFNSLS YQAGSRHVNQ WVSLSSLDHG RFMDADGGLQ VQAGSWNSGM QNSNSSTGSN  60
VSFVGMGYGN GLQMPKEEVS SWEDASPFAS PESMSVPMPV PRSPLGVVKT QPVSRAGGDA  120
QGHIMAERRR REKLSQRFIA LSAIVPGLKK TDKASVLGDT IKYLRQMEER VKSLEEEAKQ  180
KTVHSMVLQV KKPQLLPSRD EAPSSEPETD SFHTSFNDAL PEIEARICDK SVLIRIVCEK  240
RQGGVVEQVL AEVEKLHLTI INSSVLSFGA SSLNIIIVAQ VIGGSLEREY VKSCDLVIIH  300
GV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1127132ERRRRE
2128133RRRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.16e-52bHLH family protein