PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0016s0314.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 350aa MW: 38096.1 Da PI: 4.5926 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.5 | 2.7e-09 | 279 | 319 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+RR++iN+++ L+ l+P+ +K++ +++L +Av+Y+k Lq Kaladp0016s0314.1.p 279 RKRREKINERLRILQGLVPNG-----TKVDISTMLDEAVHYVKFLQ 319 9******************97.....8******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 350 aa Download sequence |
MEHFGAMFEL SGMYTTEEES NFLTQLLGEF SPAVGLNGES SDLSVSETNF WPIQTCVSNV 60 ASRRVDDDSF VYTSDPSCFS SQETSAYSDG SDMTKFLHGK GQGAYYQHLG DAGNCFAGDE 120 IPSYYNSVDF SFEEEENVSS TGYVCTDLLM QLDSAKVEAG VGESLPSPIA FRGTKSETQA 180 LDDAVEEKGA RPPAESKKRP RISTEAQKSK RSVKLRKSKK AADVDEDKSD SSGGSLLRQA 240 STSNSSKDDT GADEGSTPPS GKTRANRGSA TDPQSLYARK RREKINERLR ILQGLVPNGT 300 KVDISTMLDE AVHYVKFLQL QIKLLSSDEM WMYAPLAYNG MALGLDIKI* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 279 | 284 | RKRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G33880.1 | 1e-52 | bHLH family protein |