PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0016s0222.6.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 559aa MW: 62746.7 Da PI: 5.9592

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0016s0222.6.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.1	6.4e-13	332	376	6	55
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 e+ErrRR+++N+++ +Lr l+P + Kl+Ka+iL A++Y+k+L+ Kaladp0016s0222.6.p 332 LEAERRRRKKLNERLYKLRALVPIiS------KLDKASILVDAIDYVKQLK 376 589*******************66......***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 559 aa Download sequence
MKQSEVGARR SMLNFMDRLR PLVGSKGWDY CAVWRLNQDQ RFLELMGCCC AGADNEQDKL 60 KFLVSPQLPC RDTVFQHQRT ECCDHLCHLP SSVPLNSEFD LISSNLFDSS KIRFQILTRV 120 LFFCSIYAEA FFSSQPRWLN VNLNTFSDPQ ALAKEVVGTQ VLIPVLGGLV ELFVAKQVAE 180 DKNVVDFIAA QCAIPLELDA LLTSSLQTRT NPAEENPQPG AERNHASPSN SYQFHQPVAN 240 NTNQQACKMS SPKGFSQQFN CDSAAENEPR NIDAMMMSGG SGSASDMPSQ SKDGVRLEAG 300 RSDSTSDCSD QIDDEDEAKC RRRNGKGQSK NLEAERRRRK KLNERLYKLR ALVPIISKLD 360 KASILVDAID YVKQLKKQVE ELRKELEQES DNKGDQTPAD SVSEFVAPNT RNVAKPMGHE 420 KVQQMEPQVE VTPVDGSKFF IRVFCEQKPG GFVRLLEALS SLGLEVTNVN VTSYRMLVSN 480 VFQVEMTRDD IDDHHVAADD LRKSLLELTQ IPVEAPWPDP LPDTTSNMPE YGVRADNHFP 540 HHHALLNHHT SPYHFHHN*

Sequence ? help Back to Top

Protein Sequence Length: 559 aa Download sequence

MKQSEVGARR SMLNFMDRLR PLVGSKGWDY CAVWRLNQDQ RFLELMGCCC AGADNEQDKL  60
KFLVSPQLPC RDTVFQHQRT ECCDHLCHLP SSVPLNSEFD LISSNLFDSS KIRFQILTRV  120
LFFCSIYAEA FFSSQPRWLN VNLNTFSDPQ ALAKEVVGTQ VLIPVLGGLV ELFVAKQVAE  180
DKNVVDFIAA QCAIPLELDA LLTSSLQTRT NPAEENPQPG AERNHASPSN SYQFHQPVAN  240
NTNQQACKMS SPKGFSQQFN CDSAAENEPR NIDAMMMSGG SGSASDMPSQ SKDGVRLEAG  300
RSDSTSDCSD QIDDEDEAKC RRRNGKGQSK NLEAERRRRK KLNERLYKLR ALVPIISKLD  360
KASILVDAID YVKQLKKQVE ELRKELEQES DNKGDQTPAD SVSEFVAPNT RNVAKPMGHE  420
KVQQMEPQVE VTPVDGSKFF IRVFCEQKPG GFVRLLEALS SLGLEVTNVN VTSYRMLVSN  480
VFQVEMTRDD IDDHHVAADD LRKSLLELTQ IPVEAPWPDP LPDTTSNMPE YGVRADNHFP  540
HHHALLNHHT SPYHFHHN*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	321	341	RRRNGKGQSKNLEAERRRRKK
2	335	342	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	2e-42	bHLH family protein