PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0016s0222.5.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 532aa MW: 59552.9 Da PI: 5.8395

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0016s0222.5.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.2	6e-13	305	349	6	55
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 e+ErrRR+++N+++ +Lr l+P + Kl+Ka+iL A++Y+k+L+ Kaladp0016s0222.5.p 305 LEAERRRRKKLNERLYKLRALVPIiS------KLDKASILVDAIDYVKQLK 349 589*******************66......***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 532 aa Download sequence
MKQSEVGARR SMLNFMDRLR PLVGSKGWDY CAVWRLNQDQ RFLELMGCCC AGADNEQDKL 60 KFLVSPQLPC RDTVFQHQRT ECCDHLCHLP SSVPLNSDIY AEAFFSSQPR WLNVNLNTFS 120 DPQALAKEVV GTQVLIPVLG GLVELFVAKQ VAEDKNVVDF IAAQCAIPLE LDALLTSSLQ 180 TRTNPAEENP QPGAERNHAS PSNSYQFHQP VANNTNQQAC KMSSPKGFSQ QFNCDSAAEN 240 EPRNIDAMMM SGGSGSASDM PSQSKDGVRL EAGRSDSTSD CSDQIDDEDE AKCRRRNGKG 300 QSKNLEAERR RRKKLNERLY KLRALVPIIS KLDKASILVD AIDYVKQLKK QVEELRKELE 360 QESDNKGDQT PADSVSEFVA PNTRNVAKPM GHEKVQQMEP QVEVTPVDGS KFFIRVFCEQ 420 KPGGFVRLLE ALSSLGLEVT NVNVTSYRML VSNVFQVEMT RDDIDDHHVA ADDLRKSLLE 480 LTQIPVEAPW PDPLPDTTSN MPEYGVRADN HFPHHHALLN HHTSPYHFHH N*

Sequence ? help Back to Top

Protein Sequence Length: 532 aa Download sequence

MKQSEVGARR SMLNFMDRLR PLVGSKGWDY CAVWRLNQDQ RFLELMGCCC AGADNEQDKL  60
KFLVSPQLPC RDTVFQHQRT ECCDHLCHLP SSVPLNSDIY AEAFFSSQPR WLNVNLNTFS  120
DPQALAKEVV GTQVLIPVLG GLVELFVAKQ VAEDKNVVDF IAAQCAIPLE LDALLTSSLQ  180
TRTNPAEENP QPGAERNHAS PSNSYQFHQP VANNTNQQAC KMSSPKGFSQ QFNCDSAAEN  240
EPRNIDAMMM SGGSGSASDM PSQSKDGVRL EAGRSDSTSD CSDQIDDEDE AKCRRRNGKG  300
QSKNLEAERR RRKKLNERLY KLRALVPIIS KLDKASILVD AIDYVKQLKK QVEELRKELE  360
QESDNKGDQT PADSVSEFVA PNTRNVAKPM GHEKVQQMEP QVEVTPVDGS KFFIRVFCEQ  420
KPGGFVRLLE ALSSLGLEVT NVNVTSYRML VSNVFQVEMT RDDIDDHHVA ADDLRKSLLE  480
LTQIPVEAPW PDPLPDTTSN MPEYGVRADN HFPHHHALLN HHTSPYHFHH N*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	294	314	RRRNGKGQSKNLEAERRRRKK
2	308	315	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	1e-47	bHLH family protein