PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0016s0222.3.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 548aa MW: 61516.3 Da PI: 5.7182

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0016s0222.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.2	6.2e-13	321	365	6	55
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 e+ErrRR+++N+++ +Lr l+P + Kl+Ka+iL A++Y+k+L+ Kaladp0016s0222.3.p 321 LEAERRRRKKLNERLYKLRALVPIiS------KLDKASILVDAIDYVKQLK 365 589*******************66......***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 548 aa Download sequence
MLNFMDRLRP LVGSKGWDYC AVWRLNQDQR FLELMGCCCA GADNEQDKLK FLVSPQLPCR 60 DTVFQHQRTE CCDHLCHLPS SVPLNSEFDL ISSNLFDSSK IRFQILTRVL FFCSIYAEAF 120 FSSQPRWLNV NLNTFSDPQA LAKEVVGTQV LIPVLGGLVE LFVAKQVAED KNVVDFIAAQ 180 CAIPLELDAL LTSSLQTRTN PAEENPQPGA ERNHASPSNS YQFHQPVANN TNQQACKMSS 240 PKGFSQQFNC DSAAENEPRN IDAMMMSGGS GSASDMPSQS KDGVRLEAGR SDSTSDCSDQ 300 IDDEDEAKCR RRNGKGQSKN LEAERRRRKK LNERLYKLRA LVPIISKLDK ASILVDAIDY 360 VKQLKKQVEE LRKELEQESD NKGDQTPADS VSEFVAPNTR NVAKPMGHEK VQQMEPQVEV 420 TPVDGSKFFI RVFCEQKPGG FVRLLEALSS LGLEVTNVNV TSYRMLVSNV FQVEMTRDDI 480 DDHHVAADDL RKSLLELTQI PVEAPWPDPL PDTTSNMPEY GVRADNHFPH HHALLNHHTS 540 PYHFHHN*

Sequence ? help Back to Top

Protein Sequence Length: 548 aa Download sequence

MLNFMDRLRP LVGSKGWDYC AVWRLNQDQR FLELMGCCCA GADNEQDKLK FLVSPQLPCR  60
DTVFQHQRTE CCDHLCHLPS SVPLNSEFDL ISSNLFDSSK IRFQILTRVL FFCSIYAEAF  120
FSSQPRWLNV NLNTFSDPQA LAKEVVGTQV LIPVLGGLVE LFVAKQVAED KNVVDFIAAQ  180
CAIPLELDAL LTSSLQTRTN PAEENPQPGA ERNHASPSNS YQFHQPVANN TNQQACKMSS  240
PKGFSQQFNC DSAAENEPRN IDAMMMSGGS GSASDMPSQS KDGVRLEAGR SDSTSDCSDQ  300
IDDEDEAKCR RRNGKGQSKN LEAERRRRKK LNERLYKLRA LVPIISKLDK ASILVDAIDY  360
VKQLKKQVEE LRKELEQESD NKGDQTPADS VSEFVAPNTR NVAKPMGHEK VQQMEPQVEV  420
TPVDGSKFFI RVFCEQKPGG FVRLLEALSS LGLEVTNVNV TSYRMLVSNV FQVEMTRDDI  480
DDHHVAADDL RKSLLELTQI PVEAPWPDPL PDTTSNMPEY GVRADNHFPH HHALLNHHTS  540
PYHFHHN*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	310	330	RRRNGKGQSKNLEAERRRRKK
2	324	331	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	3e-42	bHLH family protein