PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0016s0222.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 521aa MW: 58322.5 Da PI: 5.5883

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0016s0222.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.3	5.8e-13	294	338	6	55
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 e+ErrRR+++N+++ +Lr l+P + Kl+Ka+iL A++Y+k+L+ Kaladp0016s0222.2.p 294 LEAERRRRKKLNERLYKLRALVPIiS------KLDKASILVDAIDYVKQLK 338 589*******************66......***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 521 aa Download sequence
MLNFMDRLRP LVGSKGWDYC AVWRLNQDQR FLELMGCCCA GADNEQDKLK FLVSPQLPCR 60 DTVFQHQRTE CCDHLCHLPS SVPLNSDIYA EAFFSSQPRW LNVNLNTFSD PQALAKEVVG 120 TQVLIPVLGG LVELFVAKQV AEDKNVVDFI AAQCAIPLEL DALLTSSLQT RTNPAEENPQ 180 PGAERNHASP SNSYQFHQPV ANNTNQQACK MSSPKGFSQQ FNCDSAAENE PRNIDAMMMS 240 GGSGSASDMP SQSKDGVRLE AGRSDSTSDC SDQIDDEDEA KCRRRNGKGQ SKNLEAERRR 300 RKKLNERLYK LRALVPIISK LDKASILVDA IDYVKQLKKQ VEELRKELEQ ESDNKGDQTP 360 ADSVSEFVAP NTRNVAKPMG HEKVQQMEPQ VEVTPVDGSK FFIRVFCEQK PGGFVRLLEA 420 LSSLGLEVTN VNVTSYRMLV SNVFQVEMTR DDIDDHHVAA DDLRKSLLEL TQIPVEAPWP 480 DPLPDTTSNM PEYGVRADNH FPHHHALLNH HTSPYHFHHN *

Sequence ? help Back to Top

Protein Sequence Length: 521 aa Download sequence

MLNFMDRLRP LVGSKGWDYC AVWRLNQDQR FLELMGCCCA GADNEQDKLK FLVSPQLPCR  60
DTVFQHQRTE CCDHLCHLPS SVPLNSDIYA EAFFSSQPRW LNVNLNTFSD PQALAKEVVG  120
TQVLIPVLGG LVELFVAKQV AEDKNVVDFI AAQCAIPLEL DALLTSSLQT RTNPAEENPQ  180
PGAERNHASP SNSYQFHQPV ANNTNQQACK MSSPKGFSQQ FNCDSAAENE PRNIDAMMMS  240
GGSGSASDMP SQSKDGVRLE AGRSDSTSDC SDQIDDEDEA KCRRRNGKGQ SKNLEAERRR  300
RKKLNERLYK LRALVPIISK LDKASILVDA IDYVKQLKKQ VEELRKELEQ ESDNKGDQTP  360
ADSVSEFVAP NTRNVAKPMG HEKVQQMEPQ VEVTPVDGSK FFIRVFCEQK PGGFVRLLEA  420
LSSLGLEVTN VNVTSYRMLV SNVFQVEMTR DDIDDHHVAA DDLRKSLLEL TQIPVEAPWP  480
DPLPDTTSNM PEYGVRADNH FPHHHALLNH HTSPYHFHHN *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	283	303	RRRNGKGQSKNLEAERRRRKK
2	297	304	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	2e-47	bHLH family protein