PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0016s0222.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 563aa MW: 63190.2 Da PI: 5.8447

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0016s0222.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.1	6.4e-13	336	380	6	55
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 e+ErrRR+++N+++ +Lr l+P + Kl+Ka+iL A++Y+k+L+ Kaladp0016s0222.1.p 336 LEAERRRRKKLNERLYKLRALVPIiS------KLDKASILVDAIDYVKQLK 380 589*******************66......***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 563 aa Download sequence
MKQSEVGARR SMLNFMDRLR PLVGSKGWDY CAVWRLNQDQ RFLELMGCCC AGADNEQDKL 60 KFLVSPQLPC RDTVFQHQRT ECCDHLCHLP SSVPLNSEFD LISSNLFDSS KIRFQILTRV 120 LFFCSIYAEA FFSSQPRWLN VNLNTFSDPQ ALAKSVEQEV VGTQVLIPVL GGLVELFVAK 180 QVAEDKNVVD FIAAQCAIPL ELDALLTSSL QTRTNPAEEN PQPGAERNHA SPSNSYQFHQ 240 PVANNTNQQA CKMSSPKGFS QQFNCDSAAE NEPRNIDAMM MSGGSGSASD MPSQSKDGVR 300 LEAGRSDSTS DCSDQIDDED EAKCRRRNGK GQSKNLEAER RRRKKLNERL YKLRALVPII 360 SKLDKASILV DAIDYVKQLK KQVEELRKEL EQESDNKGDQ TPADSVSEFV APNTRNVAKP 420 MGHEKVQQME PQVEVTPVDG SKFFIRVFCE QKPGGFVRLL EALSSLGLEV TNVNVTSYRM 480 LVSNVFQVEM TRDDIDDHHV AADDLRKSLL ELTQIPVEAP WPDPLPDTTS NMPEYGVRAD 540 NHFPHHHALL NHHTSPYHFH HN*

Sequence ? help Back to Top

Protein Sequence Length: 563 aa Download sequence

MKQSEVGARR SMLNFMDRLR PLVGSKGWDY CAVWRLNQDQ RFLELMGCCC AGADNEQDKL  60
KFLVSPQLPC RDTVFQHQRT ECCDHLCHLP SSVPLNSEFD LISSNLFDSS KIRFQILTRV  120
LFFCSIYAEA FFSSQPRWLN VNLNTFSDPQ ALAKSVEQEV VGTQVLIPVL GGLVELFVAK  180
QVAEDKNVVD FIAAQCAIPL ELDALLTSSL QTRTNPAEEN PQPGAERNHA SPSNSYQFHQ  240
PVANNTNQQA CKMSSPKGFS QQFNCDSAAE NEPRNIDAMM MSGGSGSASD MPSQSKDGVR  300
LEAGRSDSTS DCSDQIDDED EAKCRRRNGK GQSKNLEAER RRRKKLNERL YKLRALVPII  360
SKLDKASILV DAIDYVKQLK KQVEELRKEL EQESDNKGDQ TPADSVSEFV APNTRNVAKP  420
MGHEKVQQME PQVEVTPVDG SKFFIRVFCE QKPGGFVRLL EALSSLGLEV TNVNVTSYRM  480
LVSNVFQVEM TRDDIDDHHV AADDLRKSLL ELTQIPVEAP WPDPLPDTTS NMPEYGVRAD  540
NHFPHHHALL NHHTSPYHFH HN*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	325	345	RRRNGKGQSKNLEAERRRRKK
2	339	346	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	3e-42	bHLH family protein