PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0016s0053.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 571aa MW: 61200.3 Da PI: 5.159

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0016s0053.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.8	1.5e-11	386	428	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L Kaladp0016s0053.1.p 386 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 428 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 571 aa Download sequence
MISGVNVWMG DREEDQNPGG WGAGTNGCLN LGAPTEQRGG GEEDDINSSS LSAFKSMLEV 60 EEEDDWYNNG GAAAAAGGLH PHIAYASNPD ALGAAATAAG DGHNITNSLM LYQQQHHSVD 120 SSASGSPSFN NLDASQVQFY LQPKPMPSSS SILSFMPAQL DHPSFDLGCE QNFLDAQSSS 180 FFMNANGRGS GVFFNGFSDL MNSNSNHQIS NLMGLGSRFS IDNNGVATGS GVGFDLGFKG 240 FDDVGSNGAF MNRSKLLRPL DSFPSTGAQP TLFQKRAALR KNLAESGGGN VGVLALQSGE 300 VEVDKGKREM GLNEMLLKRK SRSGMDEFDD VSIDGSGLNY DSDEFMESYK LEENGKNGGS 360 SSNANSTVTG GDHKGKKKGL PAKNLMAERR RRKKLNDRLY MLRSVVPKIS KMDRASILGD 420 AIEYLKELLQ KINDLHNELE STPAGSSLTP TTPFPPLTPT TSTLPCRIKE ELCPSSLPSP 480 DGQPARVEVR LREGRSVNIH MFCSRRPGLL LSTMRALDTL GLDIQQAVIS CFNGFAMDIF 540 KAEQCKEGQD VHPDQIKAML LESAGFHGVA *

Sequence ? help Back to Top

Protein Sequence Length: 571 aa Download sequence

MISGVNVWMG DREEDQNPGG WGAGTNGCLN LGAPTEQRGG GEEDDINSSS LSAFKSMLEV  60
EEEDDWYNNG GAAAAAGGLH PHIAYASNPD ALGAAATAAG DGHNITNSLM LYQQQHHSVD  120
SSASGSPSFN NLDASQVQFY LQPKPMPSSS SILSFMPAQL DHPSFDLGCE QNFLDAQSSS  180
FFMNANGRGS GVFFNGFSDL MNSNSNHQIS NLMGLGSRFS IDNNGVATGS GVGFDLGFKG  240
FDDVGSNGAF MNRSKLLRPL DSFPSTGAQP TLFQKRAALR KNLAESGGGN VGVLALQSGE  300
VEVDKGKREM GLNEMLLKRK SRSGMDEFDD VSIDGSGLNY DSDEFMESYK LEENGKNGGS  360
SSNANSTVTG GDHKGKKKGL PAKNLMAERR RRKKLNDRLY MLRSVVPKIS KMDRASILGD  420
AIEYLKELLQ KINDLHNELE STPAGSSLTP TTPFPPLTPT TSTLPCRIKE ELCPSSLPSP  480
DGQPARVEVR LREGRSVNIH MFCSRRPGLL LSTMRALDTL GLDIQQAVIS CFNGFAMDIF  540
KAEQCKEGQD VHPDQIKAML LESAGFHGVA *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	376	394	KKKGLPAKNLMAERRRRKK
2	388	395	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-117	bHLH family protein