PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0016s0031.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-YC
Protein Properties Length: 223aa    MW: 24471.7 Da    PI: 5.0294
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0016s0031.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC179.23.9e-56371411102
                NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd 87 
                          ql++fw++q   ie+++dfknh+lPlarikki+kadedv+misaeaP+l+skacelfilelt+rswlhaeenkrrtl+k+diaaa+trtd
  Kaladp0016s0031.1.p  37 QLQMFWTYQrqeIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFSKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTD 126
                          89*****998899***************************************************************************** PP

                NF-YC  88 ifdflvdivprdelk 102
                          ifdflvdivpr+e+k
  Kaladp0016s0031.1.p 127 IFDFLVDIVPREEIK 141
                          ***********9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MDNNNQLQQV GQHPPPPAAG PPPPPFHHQL LQQQQQQLQM FWTYQRQEIE QVNDFKNHQL  60
PLARIKKIMK ADEDVRMISA EAPILFSKAC ELFILELTIR SWLHAEENKR RTLQKNDIAA  120
AITRTDIFDF LVDIVPREEI KEEVGALMGS GVVGGTVPFY YPAMGQPAGM MMGRPVGDPA  180
SGAYLAPPSQ AWQSVWQTPG ADEGAYGSGG GNGGQQQGNV DG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1110116RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63470.27e-85NF-YC family protein