PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0015s0124.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 631aa MW: 70501.4 Da PI: 4.8655 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.1 | 0.00037 | 455 | 486 | 17 | 54 |
HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 N++f++Lr+++P+a + +Ka++Le+++ +++L Kaladp0015s0124.1.p 455 NERFSTLRSMIPSA---G---ADKASVLEETIMQVQKL 486 99***********9...4...78899999998766666 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 631 aa Download sequence |
MDKDQEEMED VRLAPGNLRQ LLGVTVRSVQ WSYAIFWSMS RTKQGVLEWG DGYYNGDIKT 60 RKISQAMDVV KADKMGLERS KLLRELYELL LEGENCEEEQ QAARPSNADL CPEDLSDAEW 120 YYMVCMSFEF NLGQGLPGRA LANGQTIWLR NAQYADGKLF TRSLLAKSAS VQTVLCFPYL 180 GGVMELGTTE LVLEDPALIQ RVKTSLLEFS KPGCNVNWTF GPYSTDSDED PVCVDAKMNT 240 LQNVQLGAEN IKAEDEEMRL DGHSEDSDEE LGAGLPDCSS DTSGGNHQSH VYSWHLTDGY 300 FGADFLGFTN SSDCASQVVE SPADTKISEP RFGSPNAQNC LQENKCIKPD AHDNGSSDDL 360 HYRKVISTIL RKSNQLTGSL GCSASGYACR SGFRAWKNRG AVTSRRLLDR QRILKKTLFT 420 IPLMYSKGFI KPETEQIGKK ACDKPNDDVS RILENERFST LRSMIPSAGA DKASVLEETI 480 MQVQKLEARL GELESSVGNA REDPKWEPSR VPRDDTAEQV SDNSESERKI LKQKRKVYEC 540 ETASEVNSSL KVVIMEQEVS IEVTCRCREY LLLDIMDAVN RLKLDAHWVH SATHEGLFTL 600 KLKSKFRGTG VVPSGRVVKQ VIWESICEEV * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G63650.1 | 1e-115 | bHLH family protein |