PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0015s0018.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HSF
Protein Properties Length: 315aa    MW: 34680.5 Da    PI: 4.7449
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0015s0018.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind112.72.5e-35251172103
                          HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXX CS
         HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkk 91 
                          Fl+k+y++++d+++++lisw+e+g+ f+++ + efa+++LpkyFkh+n++SFvRQLn+YgF+kv  ++         weF+++ F+kg+k
  Kaladp0015s0018.2.p  25 FLTKTYQLVDDPAVDDLISWNEDGSGFIIWRPAEFARDLLPKYFKHNNLSSFVRQLNTYGFRKVVPDR---------WEFANDCFRKGEK 105
                          9*****************************************************************99.........************* PP

                          XXXXXXXXXXXX CS
         HSF_DNA-bind  92 ellekikrkkse 103
                           ll++i+r+k +
  Kaladp0015s0018.2.p 106 GLLRDIQRRKMS 117
                          *********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MAGMPAEQTG ESPAGEMQRA LPTPFLTKTY QLVDDPAVDD LISWNEDGSG FIIWRPAEFA  60
RDLLPKYFKH NNLSSFVRQL NTYGFRKVVP DRWEFANDCF RKGEKGLLRD IQRRKMSQLV  120
ATSPAVTPAV TLPPSTVQLV QISPSNSGEE QMFSSTSSPG GTVLRQVINS TTPELVEENE  180
RLKKENEQMT NELSHLRGLC NNIFVLMSNY GPSGQQDAGN PSMESKQLDL LQSGRFSEEQ  240
GGSSGGGAGA LDNKEVDEDT SPKLFGVSIG AKRMRRCEET ESSERHQQQR ADSQTENNNA  300
QSDMKLEPSQ SGPS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11660.13e-93HSF family protein