PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0012s0069.4.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 524aa MW: 58165.4 Da PI: 4.9008

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0012s0069.4.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	45.6	1.3e-14	324	370	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L+ Kaladp0012s0069.4.p 324 NHVLAERRRREKLNERFVILRSLVPFV-----TKMDKASILGDTIEYLKQLR 370 7999********************8.....8***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 524 aa Download sequence
MDDQSARVQT VLCIPVADGV VEFGSTEMIQ EDLGLVRHVK TFFHDYNRSQ HAPPPKPALS 60 GHSTSNPATS SQCFHSPPPF AGMSSNNNHS NPGNNDEDED EEEENEEPGG LDSEAGTGRV 120 AGEVSELMQM EISDLDIRVR SPEDASNNLE SDFNVLPASR IQKNKDDGHF TTESYKIDSA 180 RRWALMQNQM RTGGVHLLQP PPFSETQLLE DLTQEDSHYS HTVSSILHHH QQPPLPESFF 240 SAEDLILSAD SAFAKWTLYG DQVAATTTGG AGSQWLLKFI LFTVPYLHGK YPEENEPCKS 300 ADMSEAAQQL KKGAGAPQED MSVNHVLAER RRREKLNERF VILRSLVPFV TKMDKASILG 360 DTIEYLKQLR RKIQDLEVKA KQMEVEQRSG LTSQDRTWSG TGSEKRKMRA VEVTGSPKPV 420 TVVEPPPPPP PVELLGLMDA NTVQVSIIET DALVELQCPY REALLLDVMM KLRDLRIEVT 480 AVQSSVTDGS FVAELRAKVK ENVNGKKMKI AEVKRAIYQI IPE*

Sequence ? help Back to Top

Protein Sequence Length: 524 aa Download sequence

MDDQSARVQT VLCIPVADGV VEFGSTEMIQ EDLGLVRHVK TFFHDYNRSQ HAPPPKPALS  60
GHSTSNPATS SQCFHSPPPF AGMSSNNNHS NPGNNDEDED EEEENEEPGG LDSEAGTGRV  120
AGEVSELMQM EISDLDIRVR SPEDASNNLE SDFNVLPASR IQKNKDDGHF TTESYKIDSA  180
RRWALMQNQM RTGGVHLLQP PPFSETQLLE DLTQEDSHYS HTVSSILHHH QQPPLPESFF  240
SAEDLILSAD SAFAKWTLYG DQVAATTTGG AGSQWLLKFI LFTVPYLHGK YPEENEPCKS  300
ADMSEAAQQL KKGAGAPQED MSVNHVLAER RRREKLNERF VILRSLVPFV TKMDKASILG  360
DTIEYLKQLR RKIQDLEVKA KQMEVEQRSG LTSQDRTWSG TGSEKRKMRA VEVTGSPKPV  420
TVVEPPPPPP PVELLGLMDA NTVQVSIIET DALVELQCPY REALLLDVMM KLRDLRIEVT  480
AVQSSVTDGS FVAELRAKVK ENVNGKKMKI AEVKRAIYQI IPE*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	329	334	ERRRRE
2	330	335	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	2e-53	bHLH family protein