PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0012s0069.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 524aa MW: 58165.4 Da PI: 4.9008 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 45.6 | 1.3e-14 | 324 | 370 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L+ Kaladp0012s0069.3.p 324 NHVLAERRRREKLNERFVILRSLVPFV-----TKMDKASILGDTIEYLKQLR 370 7999**********************8.....8*****************95 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 524 aa Download sequence |
MDDQSARVQT VLCIPVADGV VEFGSTEMIQ EDLGLVRHVK TFFHDYNRSQ HAPPPKPALS 60 GHSTSNPATS SQCFHSPPPF AGMSSNNNHS NPGNNDEDED EEEENEEPGG LDSEAGTGRV 120 AGEVSELMQM EISDLDIRVR SPEDASNNLE SDFNVLPASR IQKNKDDGHF TTESYKIDSA 180 RRWALMQNQM RTGGVHLLQP PPFSETQLLE DLTQEDSHYS HTVSSILHHH QQPPLPESFF 240 SAEDLILSAD SAFAKWTLYG DQVAATTTGG AGSQWLLKFI LFTVPYLHGK YPEENEPCKS 300 ADMSEAAQQL KKGAGAPQED MSVNHVLAER RRREKLNERF VILRSLVPFV TKMDKASILG 360 DTIEYLKQLR RKIQDLEVKA KQMEVEQRSG LTSQDRTWSG TGSEKRKMRA VEVTGSPKPV 420 TVVEPPPPPP PVELLGLMDA NTVQVSIIET DALVELQCPY REALLLDVMM KLRDLRIEVT 480 AVQSSVTDGS FVAELRAKVK ENVNGKKMKI AEVKRAIYQI IPE* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 329 | 334 | ERRRRE |
2 | 330 | 335 | RRRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G09820.1 | 2e-53 | bHLH family protein |