PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0012s0069.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 497aa MW: 55316.2 Da PI: 5.1198

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0012s0069.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	45.7	1.2e-14	297	343	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L+ Kaladp0012s0069.2.p 297 NHVLAERRRREKLNERFVILRSLVPFV-----TKMDKASILGDTIEYLKQLR 343 7999********************8.....8***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence
MIQEDLGLVR HVKTFFHDYN RSQHAPPPKP ALSGHSTSNP ATSSQCFHSP PPFAGMSSNN 60 NHSNPGNNDE DEDEEEENEE PGGLDSEAGT GRVAGEVSEL MQMEISDLDI RVRSPEDASN 120 NLESDFNVLP ASRIQKNKDD GHFTTESYKI DSARRWALMQ NQMRTGGVHL LQPPPFSETQ 180 LLEDLTQEDS HYSHTVSSIL HHHQQPPLPE SFFSAEDLIL SADSAFAKWT LYGDQVAATT 240 TGGAGSQWLL KFILFTVPYL HGKYPEENEP CKSADMSEAA QQLKKGAGAP QEDMSVNHVL 300 AERRRREKLN ERFVILRSLV PFVTKMDKAS ILGDTIEYLK QLRRKIQDLE VKAKQMEVEQ 360 RSGLTSQDRT WSGTGSEKRK MRAVEVTGSP KPVTVVEPPP PPPPVELLGL MDANTVQVSI 420 IETDALVELQ CPYREALLLD VMMKLRDLRI EVTAVQSSVT DGSFVAELRA KVKENVNGKK 480 MKIAEVKRAI YQIIPE*

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence

MIQEDLGLVR HVKTFFHDYN RSQHAPPPKP ALSGHSTSNP ATSSQCFHSP PPFAGMSSNN  60
NHSNPGNNDE DEDEEEENEE PGGLDSEAGT GRVAGEVSEL MQMEISDLDI RVRSPEDASN  120
NLESDFNVLP ASRIQKNKDD GHFTTESYKI DSARRWALMQ NQMRTGGVHL LQPPPFSETQ  180
LLEDLTQEDS HYSHTVSSIL HHHQQPPLPE SFFSAEDLIL SADSAFAKWT LYGDQVAATT  240
TGGAGSQWLL KFILFTVPYL HGKYPEENEP CKSADMSEAA QQLKKGAGAP QEDMSVNHVL  300
AERRRREKLN ERFVILRSLV PFVTKMDKAS ILGDTIEYLK QLRRKIQDLE VKAKQMEVEQ  360
RSGLTSQDRT WSGTGSEKRK MRAVEVTGSP KPVTVVEPPP PPPPVELLGL MDANTVQVSI  420
IETDALVELQ CPYREALLLD VMMKLRDLRI EVTAVQSSVT DGSFVAELRA KVKENVNGKK  480
MKIAEVKRAI YQIIPE*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	302	307	ERRRRE
2	303	308	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	1e-53	bHLH family protein