PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0012s0069.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 677aa MW: 74850.2 Da PI: 5.1381

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0012s0069.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	45.1	1.8e-14	477	523	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L+ Kaladp0012s0069.1.p 477 NHVLAERRRREKLNERFVILRSLVPFV-----TKMDKASILGDTIEYLKQLR 523 7999********************8.....8***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 677 aa Download sequence
MAGVPLGTGG GRLQSSLQAS VQAIQWTYSL FWQLSPQNGN LVWADGYYNG AIKTRKTIQS 60 MEVSAEEASL QRSQQLRELF DSLSAGDASE APARRPSASL SPEDLTESEW FYLMCVSFSF 120 PLGVGLPGKA YARRQHVWLT GANEVESKVF SRAILAKSAR VQTVLCIPVA DGVVEFGSTE 180 MIQEDLGLVR HVKTFFHDYN RSQHAPPPKP ALSGHSTSNP ATSSQCFHSP PPFAGMSSNN 240 NHSNPGNNDE DEDEEEENEE PGGLDSEAGT GRVAGEVSEL MQMEISDLDI RVRSPEDASN 300 NLESDFNVLP ASRIQKNKDD GHFTTESYKI DSARRWALMQ NQMRTGGVHL LQPPPFSETQ 360 LLEDLTQEDS HYSHTVSSIL HHHQQPPLPE SFFSAEDLIL SADSAFAKWT LYGDQVAATT 420 TGGAGSQWLL KFILFTVPYL HGKYPEENEP CKSADMSEAA QQLKKGAGAP QEDMSVNHVL 480 AERRRREKLN ERFVILRSLV PFVTKMDKAS ILGDTIEYLK QLRRKIQDLE VKAKQMEVEQ 540 RSGLTSQDRT WSGTGSEKRK MRAVEVTGSP KPVTVVEPPP PPPPVELLGL MDANTVQVSI 600 IETDALVELQ CPYREALLLD VMMKLRDLRI EVTAVQSSVT DGSFVAELRA KVKENVNGKK 660 MKIAEVKRAI YQIIPE*

Sequence ? help Back to Top

Protein Sequence Length: 677 aa Download sequence

MAGVPLGTGG GRLQSSLQAS VQAIQWTYSL FWQLSPQNGN LVWADGYYNG AIKTRKTIQS  60
MEVSAEEASL QRSQQLRELF DSLSAGDASE APARRPSASL SPEDLTESEW FYLMCVSFSF  120
PLGVGLPGKA YARRQHVWLT GANEVESKVF SRAILAKSAR VQTVLCIPVA DGVVEFGSTE  180
MIQEDLGLVR HVKTFFHDYN RSQHAPPPKP ALSGHSTSNP ATSSQCFHSP PPFAGMSSNN  240
NHSNPGNNDE DEDEEEENEE PGGLDSEAGT GRVAGEVSEL MQMEISDLDI RVRSPEDASN  300
NLESDFNVLP ASRIQKNKDD GHFTTESYKI DSARRWALMQ NQMRTGGVHL LQPPPFSETQ  360
LLEDLTQEDS HYSHTVSSIL HHHQQPPLPE SFFSAEDLIL SADSAFAKWT LYGDQVAATT  420
TGGAGSQWLL KFILFTVPYL HGKYPEENEP CKSADMSEAA QQLKKGAGAP QEDMSVNHVL  480
AERRRREKLN ERFVILRSLV PFVTKMDKAS ILGDTIEYLK QLRRKIQDLE VKAKQMEVEQ  540
RSGLTSQDRT WSGTGSEKRK MRAVEVTGSP KPVTVVEPPP PPPPVELLGL MDANTVQVSI  600
IETDALVELQ CPYREALLLD VMMKLRDLRI EVTAVQSSVT DGSFVAELRA KVKENVNGKK  660
MKIAEVKRAI YQIIPE*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	482	487	ERRRRE
2	483	488	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	1e-87	bHLH family protein