PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0012s0036.6.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

HSF

Protein Properties

Length: 359aa MW: 40823 Da PI: 5.1303

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0012s0036.6.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113	2.1e-35	44	135	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkk 91 F++k++++++d+++++++sws+ g+sfvv+d++ f+++vLpkyFkh+nf+SFvRQLn+YgF+k++ ++ weF+++ F g++ Kaladp0012s0036.6.p 44 FVTKTFDMVDDPSTTRIVSWSRGGQSFVVWDPHAFSTTVLPKYFKHNNFSSFVRQLNTYGFRKIDPDR---------WEFANEGFLMGQR 124 9**************************************************************999.........********* PP XXXXXXXXXXX CS HSF_DNA-bind 92 ellekikrkks 102 +ll++i+r+k Kaladp0012s0036.6.p 125 HLLKYIRRRKV 135 ******986 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MDPLRAVKEE YTGGGASSSG YGGGEALTAP QPMAGLHDAG PPPFVTKTFD MVDDPSTTRI 60 VSWSRGGQSF VVWDPHAFST TVLPKYFKHN NFSSFVRQLN TYGFRKIDPD RWEFANEGFL 120 MGQRHLLKYI RRRKVSGQPT PASQQDVVPC VEVGQYGTDG EVDRLRRDKQ ILMLELVKLR 180 QQQQNTRTYL QAMEQRIRGT EQKQQRMMAF LARAMQNPAF IHQLVQQKEK RKELEAAVSK 240 KRRWSIDQGC SQDVEGWNLS LIKAEPEEFQ EFGFEVSELE ALALEMQGYG RAGKARLEVI 300 ERRESMDKEL DEEFWEELLT GRLEGELDLD VPDTKDFGED EDVSLLADKL GYLGSSPK*

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MDPLRAVKEE YTGGGASSSG YGGGEALTAP QPMAGLHDAG PPPFVTKTFD MVDDPSTTRI  60
VSWSRGGQSF VVWDPHAFST TVLPKYFKHN NFSSFVRQLN TYGFRKIDPD RWEFANEGFL  120
MGQRHLLKYI RRRKVSGQPT PASQQDVVPC VEVGQYGTDG EVDRLRRDKQ ILMLELVKLR  180
QQQQNTRTYL QAMEQRIRGT EQKQQRMMAF LARAMQNPAF IHQLVQQKEK RKELEAAVSK  240
KRRWSIDQGC SQDVEGWNLS LIKAEPEEFQ EFGFEVSELE ALALEMQGYG RAGKARLEVI  300
ERRESMDKEL DEEFWEELLT GRLEGELDLD VPDTKDFGED EDVSLLADKL GYLGSSPK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-120	HSF family protein