PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0011s1278.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | GRF | ||||||||
Protein Properties | Length: 493aa MW: 53188.6 Da PI: 8.7119 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 74.2 | 1.4e-23 | 173 | 217 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+ v ++k+CE+H+hrgr rsrk +e+ Kaladp0011s1278.1.p 173 DPEPGRCRRTDGKKWRCSNGVALDQKYCEKHVHRGRPRSRKLVEA 217 79***************************************9985 PP | |||||||
2 | QLQ | 47.4 | 5.9e-17 | 115 | 147 | 2 | 34 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqa 34 +FTaaQ+ +L++Q++++Ky++++ PvP +Ll++ Kaladp0011s1278.1.p 115 PFTAAQWKELERQAMVFKYMMHSIPVPYDLLLP 147 8*****************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 493 aa Download sequence |
MSMDLCRPFL SGDGSDYDLG VGISGPASNM NRSCMMMMPM SMMGSSGGEI LSHSVAAEVV 60 DVRTKLMLEQ QHHQQLQQQQ QPFDMYAATC GGSVIKSPGN GGMAAAAAAS MGFFPFTAAQ 120 WKELERQAMV FKYMMHSIPV PYDLLLPFIT ATNNDPSGVR RDSHLLRFLK NGDPEPGRCR 180 RTDGKKWRCS NGVALDQKYC EKHVHRGRPR SRKLVEAASS DFNNKSNKKP RPLPQAQPNA 240 PPPAPVSGSQ NGAGSDLKIP RSAAVYANAA HGNQPSSVPA SLLPQSHPRN NVDWSEGQWN 300 RLMAQSKRGD APERSHYSNA SLYHQQLSLN SYAQFASAHD DSQSKREFEL FLNPDLKKPL 360 MDDAWTANAA STHSCNGLVS LGLSMGHVYN VVDEMSVTEQ GKQPQMGNWL TQSGGPLGEV 420 LRPTATSSPT TAAASDSCNN KNSPQVTSSS PSGVLQKAVA SHSDSTSHSS QPKSGLQWLS 480 QDKLPSSPGQ HV* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53660.1 | 1e-34 | GRF family protein |