PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0011s1050.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | NF-YC | ||||||||
Protein Properties | Length: 224aa MW: 24565.9 Da PI: 5.2341 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 176.7 | 2.3e-55 | 33 | 135 | 1 | 100 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd 87 ql++fw++q ie+++dfknh+lPlarikki+kadedv+misaeaP+l++kacelfilelt+rswlhaeenkrrtl+k+diaaa+trtd Kaladp0011s1050.1.p 33 QLQMFWTYQrqeIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTD 122 89*****998899***************************************************************************** PP NF-YC 88 ifdflvdivprde 100 ifdflvdivpr+e Kaladp0011s1050.1.p 123 IFDFLVDIVPRSE 135 **********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MDNNPPPAPP LPQQQQQLQP APLQHLLQQQ QQQLQMFWTY QRQEIEHVND FKNHQLPLAR 60 IKKIMKADED VRMISAEAPI LFAKACELFI LELTIRSWLH AEENKRRTLQ KNDIAAAITR 120 TDIFDFLVDI VPRSEDDPSA TAAAGLPLPL PLPVPATASG VPFYYPPVVQ PAAAGMMTIG 180 RPAAAIDPSA AGVYSQPWQS VWAHPTADGG SGDQGRNLDG AQS* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 106 | 112 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63470.2 | 3e-84 | NF-YC family protein |