PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0011s1017.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Protein Properties

Length: 627aa MW: 69028.6 Da PI: 8.5846

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0011s1017.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	55.4	1.1e-17	11	102	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 ffkv+ d ++ l+lp kf+ ++ ++ ++++ l+d+s r+W+v + +k g++ ++kGW++F ka++L+ gD+vvF++ + Kaladp0011s1017.2.p 11 FFKVM--IDEDFLRVLYLPPKFT-RIapDL--LKNTKTYLQDLSERKWNVAV--SKENGSFAIKKGWSDFGKAHNLEIGDIVVFHYFPGR 93 89999..555555679****9.674644..46678***********..99999************************87434 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 f +v++f++ Kaladp0011s1017.2.p 94 YF--TVQIFNR 102 55..8999887 PP
2	B3	40.8	4e-13	554	620	31	99
.--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 31 eesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 k ++l+d +r+W v + k+++ +lt+GW+ F +an+++ gD ++Fk+ ++e+++ v+++r+ Kaladp0011s1017.2.p 554 SDAKLVILRDAASRVWPVHY--YHKPSMKILTTGWSAFSQANKVQLGDECIFKVAPEEETTYDVSIVRQ 620 456789************..89999999*********************9877999999999885 PP

Sequence ? help Back to Top
Protein Sequence Length: 627 aa Download sequence
MGSLRETIVS FFKVMIDEDF LRVLYLPPKF TRIAPDLLKN TKTYLQDLSE RKWNVAVSKE 60 NGSFAIKKGW SDFGKAHNLE IGDIVVFHYF PGRYFTVQIF NRSACDVRNF GVDVGSTRKR 120 RRPEVIAADK NGKPAGNRDL DPLTAAPMES YKKGKREPAD FVVPMESNKR GKREPADFGD 180 ADIQFLMIDR NRVDEKREDR MVIDLSSYEM PNAEATSVIQ KAANGSPVPH AGVLVKHEAE 240 PGSTDAGNYD LPAADVVSVE QWAGNGPLIP HAGAVVQFKA EPGSMEVANL KQETKWDVVL 300 HESAKQMAID RSWHSDVKRE VHDTLAVGAP SRMTPMSPKY DAKSEVKKLS TAKPVVKIKK 360 EPGIQTSEET VIDLSDYKMS TADVKGSKER AGSRASALFA GSLVKCKAEP GSAEVSNIKQ 420 EMQCNAELPE RMKPVEIRRS SYAVVNRKVC EYDTTVAPGH TAPLVPKCDT NSDFLKLATP 480 KSGREAKTPY APGQSGNAFV KVKKEPQTET FEETGLAFVT AGAGDLHCPI TSASSLFLEL 540 PASLPLFRLT SQTSDAKLVI LRDAASRVWP VHYYHKPSMK ILTTGWSAFS QANKVQLGDE 600 CIFKVAPEEE TTYDVSIVRQ GSRPIS*

Sequence ? help Back to Top

Protein Sequence Length: 627 aa Download sequence

MGSLRETIVS FFKVMIDEDF LRVLYLPPKF TRIAPDLLKN TKTYLQDLSE RKWNVAVSKE  60
NGSFAIKKGW SDFGKAHNLE IGDIVVFHYF PGRYFTVQIF NRSACDVRNF GVDVGSTRKR  120
RRPEVIAADK NGKPAGNRDL DPLTAAPMES YKKGKREPAD FVVPMESNKR GKREPADFGD  180
ADIQFLMIDR NRVDEKREDR MVIDLSSYEM PNAEATSVIQ KAANGSPVPH AGVLVKHEAE  240
PGSTDAGNYD LPAADVVSVE QWAGNGPLIP HAGAVVQFKA EPGSMEVANL KQETKWDVVL  300
HESAKQMAID RSWHSDVKRE VHDTLAVGAP SRMTPMSPKY DAKSEVKKLS TAKPVVKIKK  360
EPGIQTSEET VIDLSDYKMS TADVKGSKER AGSRASALFA GSLVKCKAEP GSAEVSNIKQ  420
EMQCNAELPE RMKPVEIRRS SYAVVNRKVC EYDTTVAPGH TAPLVPKCDT NSDFLKLATP  480
KSGREAKTPY APGQSGNAFV KVKKEPQTET FEETGLAFVT AGAGDLHCPI TSASSLFLEL  540
PASLPLFRLT SQTSDAKLVI LRDAASRVWP VHYYHKPSMK ILTTGWSAFS QANKVQLGDE  600
CIFKVAPEEE TTYDVSIVRQ GSRPIS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	118	122	RKRRR
2	118	155	RKRRRPEVIAADKNGKPAGNRDLDPLTAAPMESYKKGK
3	119	156	RKRRRPEVIAADKNGKPAGNRDLDPLTAAPMESYKKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53310.1	6e-09	B3 family protein