PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0011s0974.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | LBD | ||||||||
Protein Properties | Length: 181aa MW: 19830.5 Da PI: 7.3011 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 142 | 1.9e-44 | 7 | 106 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 +Ca+Ck+lrr+CakdC++apyfp+++p+kfa vhk+FGasnv+k+l++lp ++r+da+sslvyeA ar+rdPvyG+vg i+ lq+q++ql Kaladp0011s0974.1.p 7 PCASCKLLRRRCAKDCIFAPYFPSDDPHKFATVHKVFGASNVSKMLQELPLHQRSDAVSSLVYEASARMRDPVYGCVGAISYLQSQVSQL 96 7***************************************************************************************** PP DUF260 91 kaelallkee 100 + +la++++e Kaladp0011s0974.1.p 97 QMQLAVAQAE 106 ******9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence |
MAGGNSPCAS CKLLRRRCAK DCIFAPYFPS DDPHKFATVH KVFGASNVSK MLQELPLHQR 60 SDAVSSLVYE ASARMRDPVY GCVGAISYLQ SQVSQLQMQL AVAQAEILCI QMQQEPAAAS 120 SLATIQPTLS VDDKSFLFNN SQLIGNNNIN QLSQLFNYSA SSTNNVINDY SLRDRESLWT 180 * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30130.1 | 1e-62 | LBD family protein |