PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0011s0964.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 355aa    MW: 37660 Da    PI: 8.2052
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0011s0964.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.73e-1854103255
                  AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                          +y+GVr+++ +g+WvAeIr+p++   r+r +lg+f tae+Aa+a+++a++ l+g
  Kaladp0011s0964.1.p  54 RYRGVRQRS-WGKWVAEIREPRK---RTRKWLGTFSTAEDAARAYDRAALVLYG 103
                          59****999.**********954...5**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MNPNLPLSNP NTEENNNSNG SSCSNSNNNT DINDSCKSNK CGKGKGGPDN NKFRYRGVRQ  60
RSWGKWVAEI REPRKRTRKW LGTFSTAEDA ARAYDRAALV LYGSRAQLNL QPSSPNAGAA  120
ASSRASSSSR ATSSSSSSST QTQLRPLLPR PPTGFNYAAF PIQPAPTAQP GSSHHQNPAA  180
FSVLSAAPSA YVPYGLYGPS LVFPNAAATN HSNSKLGHQQ QHQVTTYQSL HPFPDPNNNH  240
TCTEPVAGKN RMATVTATPT TSYSNPNSKE EVRLGNNGDG TMSYEEINSL VGSLCSNSDQ  300
GVGVGPVGQS VSDPLAVVGS GPDQDLWPSF GGEDGIPATS FWDYGQADPF LFDF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.12e-26ERF family protein