PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0011s0718.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 370aa MW: 40984.8 Da PI: 6.6407

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0011s0718.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.8	3.3e-15	56	103	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l+++ + G g+W+ +ar g+ R++k+c++rw +yl Kaladp0011s0718.1.p 56 KGLWSPEEDDKLINYMLRNGQGCWSDVARSAGLQRCGKSCRLRWINYL 103 678*******************************************97 PP
2	Myb_DNA-binding	53.6	5.1e-17	109	152	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+el+v+++ +lG++ W+ Ia++++ gRt++++k++w++ Kaladp0011s0718.1.p 109 RGAFSPQEEELIVQLHSLLGNR-WSQIAARLP-GRTDNEIKNFWNS 152 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MIFGIHALIP IIRSNSSAAM RKPAADSPFT PPPSSSSSPP PSSSSSMKSG NGKLRKGLWS 60 PEEDDKLINY MLRNGQGCWS DVARSAGLQR CGKSCRLRWI NYLRPDLKRG AFSPQEEELI 120 VQLHSLLGNR WSQIAARLPG RTDNEIKNFW NSTIKKRLKN ATSHNNMPPS ASDDDHQFSN 180 LGSSTGFMCM QRNHQHHLIH QSSNNTMFMN TAATGSYVDH SSSSGSSSSP SMALNHINSN 240 PNSLLMSCDM IFDDQSLVDI YDFGEGLVEL YVPPLDTINI DSTNTNMMSS FNNNDNILVE 300 GFKQVDQRHI MEAAARPNCR YTCGSSGVQE KQLSCEFGET NIRLGEWDLD ELMRSSSEIA 360 YSLPHLDLQ*

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MIFGIHALIP IIRSNSSAAM RKPAADSPFT PPPSSSSSPP PSSSSSMKSG NGKLRKGLWS  60
PEEDDKLINY MLRNGQGCWS DVARSAGLQR CGKSCRLRWI NYLRPDLKRG AFSPQEEELI  120
VQLHSLLGNR WSQIAARLPG RTDNEIKNFW NSTIKKRLKN ATSHNNMPPS ASDDDHQFSN  180
LGSSTGFMCM QRNHQHHLIH QSSNNTMFMN TAATGSYVDH SSSSGSSSSP SMALNHINSN  240
PNSLLMSCDM IFDDQSLVDI YDFGEGLVEL YVPPLDTINI DSTNTNMMSS FNNNDNILVE  300
GFKQVDQRHI MEAAARPNCR YTCGSSGVQE KQLSCEFGET NIRLGEWDLD ELMRSSSEIA  360
YSLPHLDLQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12870.1	2e-67	MYB family protein