PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0011s0430.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 290aa MW: 32210.1 Da PI: 7.2102 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.5 | 7.4e-14 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W ++Ed+ l +++ G g+Wk+ +++ g++R++k+c++rw +yl Kaladp0011s0430.1.p 14 KGAWCAQEDQALTAYITANGEGSWKSLPQKAGLNRCGKSCRLRWINYL 61 799*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 59 | 1.1e-18 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg +T++Ed+ll++++++lG++ W++Iar+++ gRt++++k++w++ Kaladp0011s0430.1.p 67 RGGFTQDEDDLLIKLHTLLGNR-WALIARRLP-GRTDNEIKNYWNTT 111 788*******************.*********.************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence |
MGRTPCCAKV GVNKGAWCAQ EDQALTAYIT ANGEGSWKSL PQKAGLNRCG KSCRLRWINY 60 LKPGIKRGGF TQDEDDLLIK LHTLLGNRWA LIARRLPGRT DNEIKNYWNT TLSKKVKKTT 120 TTNNNTVTNN GQPPSPDPQN CHLEFAIKRP SRSIDHHHHR NNDDDHQVLH YVKAFRCKKV 180 VLPASLLQAP LSEEEEAGGH QLMMSNNGGS VSNVEKKQQQ QDDDNMIRND LLIWEDVAGG 240 GDGLISGERS SISWASFSTE DSADLLVSMD CCEDMPDWSA LEKIYGSFS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38620.1 | 3e-56 | MYB family protein |