PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0011s0278.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

GRF

Protein Properties

Length: 279aa MW: 31702.1 Da PI: 9.8952

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0011s0278.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	81.2	9.4e-26	156	199	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v +g+k+CErH++rgr+rsrk++e Kaladp0011s0278.2.p 156 DPEPGRCRRTDGKKWRCSRDVAPGHKYCERHMNRGRNRSRKPVE 199 79***************************************987 PP
2	QLQ	49.4	1.4e-17	82	115	3	36
QLQ 3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 F+ aQ+q+L+ Q+ +++y++a++ vP+eLlq+i+ Kaladp0011s0278.2.p 82 FSSAQWQELELQAVIFRYMLAGASVPAELLQPIK 115 9********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MDFQLMQWRE HQQQSEHQQK QQGEAVGIDR KQDQHQHQQQ QQSLSALPLF LTEPVSKVGN 60 MSVLPDMPST SKFPKMMMNG QFSSAQWQEL ELQAVIFRYM LAGASVPAEL LQPIKSSLLN 120 SSSFFLHHPL QHFSHYQPTT AAALLQSGYW GRAGMDPEPG RCRRTDGKKW RCSRDVAPGH 180 KYCERHMNRG RNRSRKPVEI PKPRTMAPPN CHNTGGGELW KTANPMMASP LGEASRARFS 240 SFGTAAPSVD MLQLNQRYIT ACWYCLKEVN WKPALYSF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36400.1	1e-54	GRF family protein