PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0011s0278.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

GRF

Protein Properties

Length: 392aa MW: 43224.7 Da PI: 9.7224

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0011s0278.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	80.5	1.5e-25	156	199	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v +g+k+CErH++rgr+rsrk++e Kaladp0011s0278.1.p 156 DPEPGRCRRTDGKKWRCSRDVAPGHKYCERHMNRGRNRSRKPVE 199 79***************************************987 PP
2	QLQ	48.7	2.2e-17	82	115	3	36
QLQ 3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 F+ aQ+q+L+ Q+ +++y++a++ vP+eLlq+i+ Kaladp0011s0278.1.p 82 FSSAQWQELELQAVIFRYMLAGASVPAELLQPIK 115 9********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MDFQLMQWRE HQQQSEHQQK QQGEAVGIDR KQDQHQHQQQ QQSLSALPLF LTEPVSKVGN 60 MSVLPDMPST SKFPKMMMNG QFSSAQWQEL ELQAVIFRYM LAGASVPAEL LQPIKSSLLN 120 SSSFFLHHPL QHFSHYQPTT AAALLQSGYW GRAGMDPEPG RCRRTDGKKW RCSRDVAPGH 180 KYCERHMNRG RNRSRKPVEI PKPRTMAPPN CHNTGGGELW KTANPMMASP LGEASRARFS 240 SFGTAAPSVD MLQLNQRSSN LLPISKSELN QTESLHSSTS DGRVLRRFFD DWPRPMAESG 300 PGGIHANPMG SSTSLSMSLP GNTASDVSLK LATGSGSEDA SAVERDRMQL SWMAQWGQHQ 360 AGPMGGPLAE ALRSSVTTTA SPTSVLHELA R*

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MDFQLMQWRE HQQQSEHQQK QQGEAVGIDR KQDQHQHQQQ QQSLSALPLF LTEPVSKVGN  60
MSVLPDMPST SKFPKMMMNG QFSSAQWQEL ELQAVIFRYM LAGASVPAEL LQPIKSSLLN  120
SSSFFLHHPL QHFSHYQPTT AAALLQSGYW GRAGMDPEPG RCRRTDGKKW RCSRDVAPGH  180
KYCERHMNRG RNRSRKPVEI PKPRTMAPPN CHNTGGGELW KTANPMMASP LGEASRARFS  240
SFGTAAPSVD MLQLNQRSSN LLPISKSELN QTESLHSSTS DGRVLRRFFD DWPRPMAESG  300
PGGIHANPMG SSTSLSMSLP GNTASDVSLK LATGSGSEDA SAVERDRMQL SWMAQWGQHQ  360
AGPMGGPLAE ALRSSVTTTA SPTSVLHELA R*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	1e-68	GRF family protein