PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0011s0067.6.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ARF | ||||||||
Protein Properties | Length: 677aa MW: 75859.5 Da PI: 5.9457 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 68.2 | 1.2e-21 | 127 | 227 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 f+k+lt sd++++g +++ +++a+++ +++ ++l+ d +g++W +++i+r++++r++lt+GW+ Fv++++L +gD ++F Kaladp0011s0067.6.p 127 FCKTLTASDTSTHGGFSVLRRHADDClppldmsQQP--PWQELVASDMHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFL 214 99****************************964333..4459************************************************ PP E-SSSEE..EEEEE- CS B3 84 ldgrsefelvvkvfr 98 + +++el+v+v+r Kaladp0011s0067.6.p 215 --RGENGELRVGVRR 227 ..449999*****97 PP | |||||||
2 | Auxin_resp | 111.8 | 6.5e-37 | 253 | 335 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha+st+s F+v+Y+Pr+s+seF+v+v+k++++ ++k+svGmRfkm+fe+e+++err+sGt+vgv++ + W +S+WrsLk Kaladp0011s0067.6.p 253 ASHALSTGSLFSVYYKPRTSRSEFIVSVNKYLESRNHKLSVGMRFKMRFEGEEVPERRFSGTIVGVEENTAFGWADSEWRSLK 335 789******************************************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 677 aa Download sequence |
MAFTPPNHFS PMLRPGTIDD ALYKELWHAC AGPLVSLPRE GERVYYFPQG HMEQLEASTN 60 HGSDQKIPTF NLPSKILCKV VYVHPRAEPD TDEVYAQITL TPEPVQSEVT SPDDPLPEPE 120 TCKVHSFCKT LTASDTSTHG GFSVLRRHAD DCLPPLDMSQ QPPWQELVAS DMHGNEWHFR 180 HIFRGQPRRH LLTTGWSVFV SSKKLVAGDA FIFLRGENGE LRVGVRRLMR QQNNMPSSVI 240 SSHSMHLGVL ATASHALSTG SLFSVYYKPR TSRSEFIVSV NKYLESRNHK LSVGMRFKMR 300 FEGEEVPERR FSGTIVGVEE NTAFGWADSE WRSLKVQWDE PSAILRPDRV SPWDLEPLVV 360 ASPPNSLSAT PAQRTKRARP PVLTSGISDQ SIIGMWKSHS DSPSAFSFCD PQRGRELYQS 420 PKLSNSLAFS TTTSIPADSS NSLYWPNHGE NAMDSYIPIS NVESAEKRQG NGNSCMLFGI 480 KISDNSKNEE AQTARMPGII LDKRPAISVD VESDPHSEPS NVNHSDAPSL SCEPDKSHMR 540 SPQELQSRQV RSCTKVHMQG MAVGRAVDLT RYDCYEDLLS KLEEMFDIQG ELSSTPKKWQ 600 VVYTDDEEDM MMVGDDPWHE FCAMVRKIFI YTMEEVKNLA PKIKLNPKEE EAKPSIPDPE 660 VILPTEDQSS VIGPNC* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59750.4 | 0.0 | ARF family protein |