PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0011s0067.4.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ARF
Protein Properties Length: 669aa    MW: 75045.6 Da    PI: 6.0298
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0011s0067.4.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B368.21.2e-21127227198
                          EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 
                          f+k+lt sd++++g +++ +++a+++       +++    ++l+  d +g++W +++i+r++++r++lt+GW+ Fv++++L +gD ++F 
  Kaladp0011s0067.4.p 127 FCKTLTASDTSTHGGFSVLRRHADDClppldmsQQP--PWQELVASDMHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFL 214
                          99****************************964333..4459************************************************ PP

                          E-SSSEE..EEEEE- CS
                   B3  84 ldgrsefelvvkvfr 98 
                            + +++el+v+v+r
  Kaladp0011s0067.4.p 215 --RGENGELRVGVRR 227
                          ..449999*****97 PP
2Auxin_resp111.96.4e-37253335183
           Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                          a+ha+st+s F+v+Y+Pr+s+seF+v+v+k++++ ++k+svGmRfkm+fe+e+++err+sGt+vgv++   + W +S+WrsLk
  Kaladp0011s0067.4.p 253 ASHALSTGSLFSVYYKPRTSRSEFIVSVNKYLESRNHKLSVGMRFKMRFEGEEVPERRFSGTIVGVEENTAFGWADSEWRSLK 335
                          789******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 669 aa     Download sequence    
MAFTPPNHFS PMLRPGTIDD ALYKELWHAC AGPLVSLPRE GERVYYFPQG HMEQLEASTN  60
HGSDQKIPTF NLPSKILCKV VYVHPRAEPD TDEVYAQITL TPEPVQSEVT SPDDPLPEPE  120
TCKVHSFCKT LTASDTSTHG GFSVLRRHAD DCLPPLDMSQ QPPWQELVAS DMHGNEWHFR  180
HIFRGQPRRH LLTTGWSVFV SSKKLVAGDA FIFLRGENGE LRVGVRRLMR QQNNMPSSVI  240
SSHSMHLGVL ATASHALSTG SLFSVYYKPR TSRSEFIVSV NKYLESRNHK LSVGMRFKMR  300
FEGEEVPERR FSGTIVGVEE NTAFGWADSE WRSLKVQWDE PSAILRPDRV SPWDLEPLVV  360
ASPPNSLSAT PAQRTKRARP PVLTSGMWKS HSDSPSAFSF CDPQRGRELY QSPKLSNSLA  420
FSTTTSIPAD SSNSLYWPNH GENAMDSYIP ISNVESAEKR QGNGNSCMLF GIKISDNSKN  480
EEAQTARMPG IILDKRPAIS VDVESDPHSE PSNVNHSDAP SLSCEPDKSH MRSPQELQSR  540
QVRSCTKVHM QGMAVGRAVD LTRYDCYEDL LSKLEEMFDI QGELSSTPKK WQVVYTDDEE  600
DMMMVGDDPW HEFCAMVRKI FIYTMEEVKN LAPKIKLNPK EEEAKPSIPD PEVILPTEDQ  660
SSVIGPNC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59750.40.0ARF family protein