PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0010s0097.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 445aa MW: 48851.2 Da PI: 5.9322

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0010s0097.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.8	1.2e-05	331	368	12	54
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L Kaladp0010s0097.1.p 331 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 368 677888999*****998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MASSEDFETA GICSGGWWNP GRSLFPPCAA PLSDFMWASS VLNGTVEEEQ AEMKQAAAAA 60 TYSRSDESDD RRSSSAEHLM SSDYTHIFQD VGQKQPHQMA DFGLSDWSQN SLLHDYSPNM 120 SIFKTVVDDQ KNNNRSSHGL YNLDPKVSQL GLLQENIDAS SYAYTSMVQA LMGPDHTDMS 180 YGFGSSFVAS STSFMQQQQE AAAASNWPKS MISPSPKQQL NGGAKRGNIS APFWDDSWMG 240 SDEIRTPESS HPLLVPALFE DHKPNNSASN SFNGRSSSTT PPKPDTKDNI LPHKLAGFTL 300 LGSKRKINPS GEPYKRPRIE TPSSLPTFKV RKEKLGDRIT ALQQLVSPFG KTDTASVLHE 360 AIEYIKFLHD QVSVLRTPYM QNGTPTNQHQ QMQGEAKNAA DEGPKQDLRS RGLCLVPISS 420 TFPVANETTA DFWTPTFGGT MTFR*

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MASSEDFETA GICSGGWWNP GRSLFPPCAA PLSDFMWASS VLNGTVEEEQ AEMKQAAAAA  60
TYSRSDESDD RRSSSAEHLM SSDYTHIFQD VGQKQPHQMA DFGLSDWSQN SLLHDYSPNM  120
SIFKTVVDDQ KNNNRSSHGL YNLDPKVSQL GLLQENIDAS SYAYTSMVQA LMGPDHTDMS  180
YGFGSSFVAS STSFMQQQQE AAAASNWPKS MISPSPKQQL NGGAKRGNIS APFWDDSWMG  240
SDEIRTPESS HPLLVPALFE DHKPNNSASN SFNGRSSSTT PPKPDTKDNI LPHKLAGFTL  300
LGSKRKINPS GEPYKRPRIE TPSSLPTFKV RKEKLGDRIT ALQQLVSPFG KTDTASVLHE  360
AIEYIKFLHD QVSVLRTPYM QNGTPTNQHQ QMQGEAKNAA DEGPKQDLRS RGLCLVPISS  420
TFPVANETTA DFWTPTFGGT MTFR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61660.1	3e-56	bHLH family protein