PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0010s0049.7.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ARF
Protein Properties Length: 573aa    MW: 63080.6 Da    PI: 9.3365
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0010s0049.7.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3764.3e-246107199
                          EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 
                          f+k+lt sd++++g +++p++ ae++       ++ + s++l+ +d++gr+W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F +
  Kaladp0010s0049.7.p   6 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyTLQRP-SQELVAKDLHGREWKFRHIYRGQPRRHLLTTGWSAFVNRKKLVSGDAVLFLR 94 
                          99****************************9955544.569************************************************4 PP

                          -SSSEE..EEEEE-S CS
                   B3  85 dgrsefelvvkvfrk 99 
                              ++ l+++v+r+
  Kaladp0010s0049.7.p  95 G--GDGILRLGVRRA 107
                          3..677778888875 PP
2Auxin_resp1033.8e-34132213182
           Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                          +++a+st+svF++ YnPr ++s+F+++ +k+ ++l +k+s G+R+km  eted++err++G v+gvsdldp+ Wp+SkW++L
  Kaladp0010s0049.7.p 132 VINAISTRSVFNISYNPRGTSSDFIIPHSKFTRSLVHKFSCGTRLKMCCETEDAAERRFTGAVTGVSDLDPIGWPGSKWKCL 213
                          6799*****************************************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 573 aa     Download sequence    
MTRHMFCKTL TASDTSTHGG FSVPRRAAED CFPPLDYTLQ RPSQELVAKD LHGREWKFRH  60
IYRGQPRRHL LTTGWSAFVN RKKLVSGDAV LFLRGGDGIL RLGVRRAAQL KEKPPFPPIF  120
REQQSHGSFS AVINAISTRS VFNISYNPRG TSSDFIIPHS KFTRSLVHKF SCGTRLKMCC  180
ETEDAAERRF TGAVTGVSDL DPIGWPGSKW KCLLVEWDDS ENNLHGGRVS PWEVEPAGFV  240
VGCCMPAPSG SKRGRNGLPS TIHNSPIPDG KGLPDFRESL RFQKVLQGQE IMSLKPQNTQ  300
NHNLAESLSC YPGTDSSRIG ALGNKISRPY FGNPDFSFNN KGFGESQWFQ RVLQGQEKTS  360
NMPYGMISCT SSHDELLGIF NGIALPNFRQ TALLHDSNSQ FHAAKSSVPV SSPSSVLMFP  420
QATSLVPNPC RVPGLLEGRG IGNQGQVSPT RPYVGELPSS YIKDNFVRFE SCIPRTQFNQ  480
QDLCGHGPRP ALSGSQKLVP SCKNSCRLFG ISLTDKEHAP NVADETILKA NQLNTGPAFR  540
ITERQFLAQH PTMALGCLQK LDSASDAITY GI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33860.11e-129ARF family protein