PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0010s0049.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ARF | ||||||||
Protein Properties | Length: 663aa MW: 73115 Da PI: 8.5949 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 75.7 | 5.3e-24 | 96 | 197 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 f+k+lt sd++++g +++p++ ae++ ++ + s++l+ +d++gr+W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F + Kaladp0010s0049.3.p 96 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyTLQRP-SQELVAKDLHGREWKFRHIYRGQPRRHLLTTGWSAFVNRKKLVSGDAVLFLR 184 99****************************9955544.569************************************************4 PP -SSSEE..EEEEE-S CS B3 85 dgrsefelvvkvfrk 99 ++ l+++v+r+ Kaladp0010s0049.3.p 185 G--GDGILRLGVRRA 197 3..677778888875 PP | |||||||
2 | Auxin_resp | 102.7 | 4.7e-34 | 222 | 303 | 1 | 82 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +++a+st+svF++ YnPr ++s+F+++ +k+ ++l +k+s G+R+km eted++err++G v+gvsdldp+ Wp+SkW++L Kaladp0010s0049.3.p 222 VINAISTRSVFNISYNPRGTSSDFIIPHSKFTRSLVHKFSCGTRLKMCCETEDAAERRFTGAVTGVSDLDPIGWPGSKWKCL 303 5799*****************************************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 663 aa Download sequence |
MVRRLSCRRR RLRNSLQGQL ECFGESPAVI CGVPPHVFCR VLDVKLHAEV DSDEVCAQVF 60 LIPVAQEQLP QVDKTEVDGE DDDINCGSKS MTRHMFCKTL TASDTSTHGG FSVPRRAAED 120 CFPPLDYTLQ RPSQELVAKD LHGREWKFRH IYRGQPRRHL LTTGWSAFVN RKKLVSGDAV 180 LFLRGGDGIL RLGVRRAAQL KEKPPFPPIF REQQSHGSFS AVINAISTRS VFNISYNPRG 240 TSSDFIIPHS KFTRSLVHKF SCGTRLKMCC ETEDAAERRF TGAVTGVSDL DPIGWPGSKW 300 KCLLVEWDDS ENNLHGGRVS PWEVEPAGFV VGCCMPAPSG SKRGRNGLPS TIHNSPIPDG 360 KGLPDFRESL RFQKVLQGQE IMSLKPQNTQ NHNLAESLSC YPGTDSSRIG ALGNKISRPY 420 FGNPDFSFNN KGFGESQWFQ RVLQGQEKTS NMPYGMISCT SSHDELLGIF NGIALPNFRQ 480 TALLHDSNSQ FHAAKSSVPV SSPSSVLMFP QATSLVPNPC RVPGLLEGRG IGNQGQVSPT 540 RPYVGELPSS YIKDNFVRFE SCIPRTQFNQ QDLCGHGPRP ALSGSQKLVP SCKNSCRLFG 600 ISLTDKEHAP NVADETILKA NQLNTGPAFR ITERQFLAQH PTMALGCLQK LDSASDAITY 660 GI* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33860.1 | 1e-153 | ARF family protein |