PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0010s0049.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ARF
Protein Properties Length: 696aa    MW: 75491.5 Da    PI: 7.6733
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0010s0049.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.65.8e-24160261199
                          EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 
                          f+k+lt sd++++g +++p++ ae++       ++ + s++l+ +d++gr+W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F +
  Kaladp0010s0049.2.p 160 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyTLQRP-SQELVAKDLHGREWKFRHIYRGQPRRHLLTTGWSAFVNRKKLVSGDAVLFLR 248
                          99****************************9955544.569************************************************4 PP

                          -SSSEE..EEEEE-S CS
                   B3  85 dgrsefelvvkvfrk 99 
                              ++ l+++v+r+
  Kaladp0010s0049.2.p 249 G--GDGILRLGVRRA 261
                          3..677778888875 PP
2Auxin_resp102.65.1e-34286367182
           Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                          +++a+st+svF++ YnPr ++s+F+++ +k+ ++l +k+s G+R+km  eted++err++G v+gvsdldp+ Wp+SkW++L
  Kaladp0010s0049.2.p 286 VINAISTRSVFNISYNPRGTSSDFIIPHSKFTRSLVHKFSCGTRLKMCCETEDAAERRFTGAVTGVSDLDPIGWPGSKWKCL 367
                          5799*****************************************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 696 aa     Download sequence    
MAATGRGLNL FDLNTAEEED AAAGGSLSPS PSPSPTSTCS GVVPGSTGCV APSVCLELWH  60
ACVGPLVSLP KKNSLVVYFP QGQLECFGES PAVICGVPPH VFCRVLDVKL HAEVDSDEVC  120
AQVFLIPVAQ EQLPQVDKTE VDGEDDDINC GSKSMTRHMF CKTLTASDTS THGGFSVPRR  180
AAEDCFPPLD YTLQRPSQEL VAKDLHGREW KFRHIYRGQP RRHLLTTGWS AFVNRKKLVS  240
GDAVLFLRGG DGILRLGVRR AAQLKEKPPF PPIFREQQSH GSFSAVINAI STRSVFNISY  300
NPRGTSSDFI IPHSKFTRSL VHKFSCGTRL KMCCETEDAA ERRFTGAVTG VSDLDPIGWP  360
GSKWKCLLVE WDDSENNLHG GRVSPWEVEP AGFVVGCCMP APSGSKRGRN GLPSTIHNSP  420
IPDGKGLPDF RESLRFQKVL QGQEIMSLKP QNTQNHNLAE SLSCYPGTDS SRIGALGNKI  480
SRPYFGNPDF SFNNKGFGES QWFQRVLQGQ EKTSNMPYGM ISCTSSHDEL LGIFNGIALP  540
NFRQTALLHD SNSQFHAAKS SVPVSSPSSV LMFPQATSLV PNPCRVPGLL EGRGIGNQGQ  600
FNQQDLCGHG PRPALSGSQK LVPSCKNSCR LFGISLTDKE HAPNVADETI LKANQLNTGP  660
AFRITERQFL AQHPTMALGC LQKLDSASDA ITYGI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33860.11e-173ARF family protein