PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0008s0762.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HSF
Protein Properties Length: 424aa    MW: 48043.7 Da    PI: 5.2063
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0008s0762.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind101.76.4e-32141062102
                          HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHH.HTTEEE---SSBTTTTXTTSEEEEESXXXXXX CS
         HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLn.mYgFkkvkdeekkskskekiweFkhksFkkgk 90 
                          Fl ++ye+++d++ ++++sws++++sfvv+d+ efak++Lp++Fkh+nf+SF+RQLn +YgF+kv+ e+         weF+++ F +g+
  Kaladp0008s0762.1.p  14 FLAQTYEMVDDPTSNTIVSWSSSNTSFVVWDPPEFAKTLLPTFFKHNNFSSFIRQLNtTYGFRKVDPEQ---------WEFANDDFLRGQ 94 
                          9********************************************************55******9998.........************ PP

                          XXXXXXXXXXXX CS
         HSF_DNA-bind  91 kellekikrkks 102
                           + +++i+r+k 
  Kaladp0008s0762.1.p  95 PHRMKNIHRRKP 106
                          *********985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    
MDESLGGSNA LPPFLAQTYE MVDDPTSNTI VSWSSSNTSF VVWDPPEFAK TLLPTFFKHN  60
NFSSFIRQLN TTYGFRKVDP EQWEFANDDF LRGQPHRMKN IHRRKPVHSH SVPNQGHGIS  120
SPLTEGLKRE KEVLQLELEE KKGGREEFEL HAQSLKQQLE CIIQRQEKLL AQVLNKPGLV  180
LSLTPTITSH ERKRRLLTTD CLQGEAEIDR NRLRNSQVIG MEEAVSATMS SLITEPIDLM  240
ESSIAHWEEI IHQMAQTCAE DVYNIQTPPL AVILTEIDPP LEQAVTNSEN RFYPMANSKE  300
NSLTFELDES QGYMNHVLSV QAAEVVQPTE KASESVNEAR TTTIVPTGAN DTFWEQFLTE  360
HSGSSNVQDA QFEKKGSETK KQSDHSKLWW NIPSVNNLVE QMSHLTPAER CQYAHHTHQY  420
CCG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1191196ERKRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18880.18e-78HSF family protein