PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0008s0740.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 272aa    MW: 30195.4 Da    PI: 7.6638
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0008s0740.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.77.3e-1267114355
                          HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          ++h+ +ErrRR+riN  +++Lr l+P       +K++Ka+ L ++++ +k+Lq
  Kaladp0008s0740.1.p  67 KNHSLAERRRRERINGHLATLRGLVPAH-----EKMDKATLLAEVINQVKDLQ 114
                          58*************************8.....8****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MEQQLWDADS VYVKMFDPFE VEPGGAGDGK EEVADSEDED MAKMAEGSGK KMKKKGVMNE  60
KATVALKNHS LAERRRRERI NGHLATLRGL VPAHEKMDKA TLLAEVINQV KDLQEHARRV  120
SKGLLIPTDA DELTVEPLHD ESQSGVITFK ASLCCDFRPD LFSDLKQAIG SLKLKTLRSE  180
ISTLGERVKT LFILSSPINV NEGEAQKNLA NAILQALSSV LYKPSPLPEY SLRTTLSQKR  240
FKTSFEDYSP RSVLSHKRFR YPSLEASSSS T*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17378ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.11e-35bHLH family protein