PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0008s0733.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 219aa MW: 23358.2 Da PI: 10.4091 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.5 | 4.3e-20 | 18 | 67 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr ++ +gr++AeIrdp++ + r++lg+f+taeeAa+a++ a+ +++g Kaladp0008s0733.1.p 18 HFRGVRKRP-WGRYAAEIRDPKK---KSRVWLGTFDTAEEAARAYDTAAIEFRG 67 69*******.**********854...6************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MAPTTAQKKA AGGEKEVHFR GVRKRPWGRY AAEIRDPKKK SRVWLGTFDT AEEAARAYDT 60 AAIEFRGAKA KTNFPFPALG RPPTLPQPNL SPSPSSTVES SSRESHTPAA SAAPSAVFGS 120 PMRFPFHNFQ LAAGSPIAGV LQPNMFFFDP VTRPARSVTF QPYPNLKSAV AVSSAAINFH 180 GPAHSDSDSS SVLDTSNPTS RPPVLDIDLN FPPPDNTA* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 2e-25 | ERF family protein |