PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0008s0620.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 259aa MW: 26348.4 Da PI: 8.05 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.4 | 2e-19 | 111 | 161 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp k +r++lg+++t eAa+a++aa+ k++g Kaladp0008s0620.1.p 111 KYRGVRRRP-WGKYAAEIRDP---ArKGARVWLGTYDTSIEAARAYDAAAFKMRG 161 8********.**********8...4445*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 259 aa Download sequence |
MNTLMASVEE ASFLDSIQQF LLMDDFVSES SSVSLQTLLS DSALSSSVGS SGSSCFGAVK 60 TEAEVSGESG LSTGGGGGLP PKPSRLSSRK PAALKVSIPA AADAEAEDDV KYRGVRRRPW 120 GKYAAEIRDP ARKGARVWLG TYDTSIEAAR AYDAAAFKMR GSRAIVNFPL EVGRRRGGGG 180 GGGGERRGAG EKADAIGCRN GGGEGGGGCG GDAVDAVVLG RMGERGGDGD FHSAAVIAFH 240 AVRVLAAESG MSINGVRR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G51190.1 | 2e-33 | ERF family protein |