PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0008s0410.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ARF
Protein Properties Length: 712aa    MW: 78101.3 Da    PI: 8.4742
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0008s0410.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.81e-23108209199
                          EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 
                          f k+lt+sd+++ g +++p+ +ae++         ++ +  t++ +d +g+ W++++iyr++++r++lt+GW+ Fv++++L +gD++vF 
  Kaladp0008s0410.1.p 108 FAKTLTQSDANNGGGFSVPRYCAETIfprldytADPPVQ--TVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFL 195
                          89****************************997556555..8************************************************ PP

                          E-SSSEE..EEEEE-S CS
                   B3  84 ldgrsefelvvkvfrk 99 
                            ++ ++el+v+++r+
  Kaladp0008s0410.1.p 196 --RTGSGELCVGIRRA 209
                          ..4479999*****97 PP
2Auxin_resp114.21.2e-37278361183
           Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 
                          aa+ a+++ +FevvY+Pra+t+eF+v ++ v++a+++++++GmRfkm fetedss++++ +Gtv++v+ +dp+rWpnS+Wr+L+
  Kaladp0008s0410.1.p 278 AATLATNGRPFEVVYYPRACTPEFCVAASAVRAAMRIQWCPGMRFKMPFETEDSSRISWfMGTVSSVQVADPLRWPNSPWRLLQ 361
                          68899*****************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 712 aa     Download sequence    
MERSLDSQLW HACAGGMVQM PKVNSKVYYF PQGHAEHAQA GLDFALSPKA GPLVPCRVAS  60
VQFLADPETD EVYAKLRLVP VGNRELEFGV EDLGVCRGSE SVDKPSSFAK TLTQSDANNG  120
GGFSVPRYCA ETIFPRLDYT ADPPVQTVIA KDVHGEIWKF RHIYRGTPRR HLLTTGWSTF  180
VNQKKLVAGD SIVFLRTGSG ELCVGIRRAK RGMESESGSG IRSQSGWSPS PGHFISPYGG  240
GGYSMFLRDD ENGFLRNGCG EGGLKTNKKV KGESVIEAAT LATNGRPFEV VYYPRACTPE  300
FCVAASAVRA AMRIQWCPGM RFKMPFETED SSRISWFMGT VSSVQVADPL RWPNSPWRLL  360
QVTWDEPDLL QNVNRVSPWL VELVSNTPAM NLPPFSSPRK KLRFPPQPDF PLDGQLSLSS  420
FSGNNLGPRS SFCCLIDNTP PGIQGARHAQ FGSSLSDIHF NSKLRSWLFP QSQQRLDQFP  480
RLFNNIISSS AKGNESESVS CLLSIGNSDH NVEKPKDGKK QPFVLFGQPI LTEQEISLRS  540
ESTLQALARN HSSDDHLERG KVHTSGLELR RSLSDTSSHP GFSRLFNFAS DELSMASGRC  600
EVFMDNDGVG RTLDLSPIQS YQQLCLKLAD LFGIGNPNAL NHALYRDATG AIKRIGDEPF  660
SDFRKSAKKL IITVDLGKKN NGREQYLSGP GKAENGLCSS KAAAGHLSIL A*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30080.10.0ARF family protein