PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0008s0398.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 213aa    MW: 23593.6 Da    PI: 5.8203
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0008s0398.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.89.6e-172271255
                  AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                          ykGVr +k +g+Wv+eIr p++   r r++lg++++a +Aa+a +aa  +l+g
  Kaladp0008s0398.1.p 22 LYKGVRKRK-WGKWVSEIRLPNS---RDRIWLGSYDSAVKAARAFDAALYCLRG 71
                         59****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MASDSCSSSH HGREDSSSSS KLYKGVRKRK WGKWVSEIRL PNSRDRIWLG SYDSAVKAAR  60
AFDAALYCLR GSGAKFNFPH SPPDMRITRP LTHAEIQEIA TSYANEEPRS DGGAEHQPLS  120
PSSQFGELNL DHNNSSNSSS GVWSGNESQI DWPLWNLLDN VPDYRYPSAE YNSFLPYQPA  180
DPQSSFGQSV YDSGHDAGGE GFSQHNLSLW DF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12430KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.14e-41ERF family protein