PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0006s0076.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ARF
Protein Properties Length: 852aa    MW: 94717.6 Da    PI: 6.2867
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0006s0076.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B372.17.2e-23155256199
                          EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 
                          f+k+lt sd++++g +++ +++a+e+      + k++ +++l+ +d++  +W++++i+r++++r++l++GW+ Fv++++L +gD ++F  
  Kaladp0006s0076.2.p 155 FCKTLTASDTSTHGGFSVLRRHADEClppldmS-KQPPTQELVAKDLHKTEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL- 242
                          99*****************************63.4445569************************************************. PP

                          -SSSEE..EEEEE-S CS
                   B3  85 dgrsefelvvkvfrk 99 
                           + +++el+v+v+r+
  Kaladp0006s0076.2.p 243 -RGENGELRVGVRRA 256
                          .449999*****996 PP
2Auxin_resp120.11.7e-39281363183
           Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                          a+ha+st+++F+v+Y+Pr+s++eF+v++e++++++k+++s+GmRfkm+fe+e+++e+r++Gt+vg++d+dp rW++SkWr+Lk
  Kaladp0006s0076.2.p 281 AWHAISTGTMFTVFYKPRTSPTEFIVPLEQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGTEDADPKRWRDSKWRCLK 363
                          89*******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 852 aa     Download sequence    
MATSEVRNGN LNARGESHTS GYSEPNGAVA SRNLAEGVGD GRVDAEDALY TELWHACAGP  60
LVTVPRQGDR VFYFPQGHIE QVEASTNKVA DQEMPVYNLP SKILCRVLDV RLMAEPVTDE  120
VFAQVILVPE NYQDENTVEK DPPPPPKPRF HVHSFCKTLT ASDTSTHGGF SVLRRHADEC  180
LPPLDMSKQP PTQELVAKDL HKTEWRFRHI FRGQPRRHLL QSGWSVFVSS KRLVAGDAFI  240
FLRGENGELR VGVRRAMRQQ GNVPSSVISS HSMHLGVLAS AWHAISTGTM FTVFYKPRTS  300
PTEFIVPLEQ YMESVKNNYS IGMRFKMRFE GEEAPEQRFT GTIVGTEDAD PKRWRDSKWR  360
CLKVRWDETS TIPRPDRVSP WKIEPALTPP ALNPIPTPRP KRPRTSVLPL SPDSSVLTRE  420
GSSKVALDPP STNGFLRLVQ GQDISTFRAN LAESNESEIV EKPGMLGIPV DEGRANVVST  480
PRRYHVENLL PLPRHETTYT DLLSGLGSGV DSSNGYCLPF HDSTAATSSM KKHSFEDEDV  540
FQKPKNHWSV RPPGGLSLQP PESSSKYPDQ CAYSLYQGGG SSVCGALEGR PMVYGLSTEH  600
RSASLFMPPP KTSYLTNFEW YRNPDPTTSS VQQLETAKPT DGSYKLFGFP LFGHQVSSEP  660
SMSGMNCAEK ALEGINHLSP ELCLVDSGLK CGHPEDSDAR DFLAVADQDR TSQYCQPISR  720
EIHGKIQSGS TRSCTKVHKQ GIALGRSVDL SKFNNYEELK VELDKLFEFG GELLAARSNW  780
LVVYTDDEGD MMLVGDDPWQ EFCGMVRKIF IYTKDEVQKM NPRNLGCSKI EENPSSADPL  840
DAVEMDISHS L*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1400406PKRPRTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein