PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0006s0076.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ARF | ||||||||
Protein Properties | Length: 852aa MW: 94717.6 Da PI: 6.2867 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 72.1 | 7.2e-23 | 155 | 256 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 f+k+lt sd++++g +++ +++a+e+ + k++ +++l+ +d++ +W++++i+r++++r++l++GW+ Fv++++L +gD ++F Kaladp0006s0076.1.p 155 FCKTLTASDTSTHGGFSVLRRHADEClppldmS-KQPPTQELVAKDLHKTEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL- 242 99*****************************63.4445569************************************************. PP -SSSEE..EEEEE-S CS B3 85 dgrsefelvvkvfrk 99 + +++el+v+v+r+ Kaladp0006s0076.1.p 243 -RGENGELRVGVRRA 256 .449999*****996 PP | |||||||
2 | Auxin_resp | 120.1 | 1.7e-39 | 281 | 363 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha+st+++F+v+Y+Pr+s++eF+v++e++++++k+++s+GmRfkm+fe+e+++e+r++Gt+vg++d+dp rW++SkWr+Lk Kaladp0006s0076.1.p 281 AWHAISTGTMFTVFYKPRTSPTEFIVPLEQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGTEDADPKRWRDSKWRCLK 363 89*******************************************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 852 aa Download sequence |
MATSEVRNGN LNARGESHTS GYSEPNGAVA SRNLAEGVGD GRVDAEDALY TELWHACAGP 60 LVTVPRQGDR VFYFPQGHIE QVEASTNKVA DQEMPVYNLP SKILCRVLDV RLMAEPVTDE 120 VFAQVILVPE NYQDENTVEK DPPPPPKPRF HVHSFCKTLT ASDTSTHGGF SVLRRHADEC 180 LPPLDMSKQP PTQELVAKDL HKTEWRFRHI FRGQPRRHLL QSGWSVFVSS KRLVAGDAFI 240 FLRGENGELR VGVRRAMRQQ GNVPSSVISS HSMHLGVLAS AWHAISTGTM FTVFYKPRTS 300 PTEFIVPLEQ YMESVKNNYS IGMRFKMRFE GEEAPEQRFT GTIVGTEDAD PKRWRDSKWR 360 CLKVRWDETS TIPRPDRVSP WKIEPALTPP ALNPIPTPRP KRPRTSVLPL SPDSSVLTRE 420 GSSKVALDPP STNGFLRLVQ GQDISTFRAN LAESNESEIV EKPGMLGIPV DEGRANVVST 480 PRRYHVENLL PLPRHETTYT DLLSGLGSGV DSSNGYCLPF HDSTAATSSM KKHSFEDEDV 540 FQKPKNHWSV RPPGGLSLQP PESSSKYPDQ CAYSLYQGGG SSVCGALEGR PMVYGLSTEH 600 RSASLFMPPP KTSYLTNFEW YRNPDPTTSS VQQLETAKPT DGSYKLFGFP LFGHQVSSEP 660 SMSGMNCAEK ALEGINHLSP ELCLVDSGLK CGHPEDSDAR DFLAVADQDR TSQYCQPISR 720 EIHGKIQSGS TRSCTKVHKQ GIALGRSVDL SKFNNYEELK VELDKLFEFG GELLAARSNW 780 LVVYTDDEGD MMLVGDDPWQ EFCGMVRKIF IYTKDEVQKM NPRNLGCSKI EENPSSADPL 840 DAVEMDISHS L* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 400 | 406 | PKRPRTS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62000.3 | 0.0 | ARF family protein |