PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0006s0075.3.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 537aa MW: 58117.1 Da PI: 7.1396

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0006s0075.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.9	1.4e-11	365	407	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L Kaladp0006s0075.3.p 365 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 407 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 537 aa Download sequence
MLSGVNVWMG DQRDDDDPPA SWPAGGKGRV NLSAPPGQRG EGGDVNSAFN SMLEVGKNDD 60 WYNNGVVASG GLHTHDAFAS DRNSLGAAAD VHSSLMLYHH HNQQHHHHSA DSCGSCSPSF 120 NYSDASQVQF YLQPKPLPSS SSLLSFMPTQ LDHSNFELGC EQSFLDSQSS SFLINLNGRG 180 SGGLFNGFSD LMNLNSNNET SSLVGSGSNL PIQSCAGAGG GVGLDLGFKG FDDVRSNGVF 240 MNRSKLLGPL DSFPSSGAQP TLFQKRAALR KNFTLQSGVV EGDKAKREAC LNEMMSKRKS 300 GSGVDEFDDV SVDGSELNYD SDEFAESYKL EENGKNGRRS SNGNRGVTVG DRKGRKKGLP 360 AKNLMAERRR RKKLNDRLYM LRSVVPKISK MDRASILGDA IEYLKELLQK INRLHDELES 420 TPAGSSLTPT TPFPSLTPTA PTLPCRIKEE LCPRSLASPN GQPAKVEVRL REGRSVNIHM 480 ICGRRPGLLQ STMRALEALG LDIQEAVISC FNGFAMDVFK AEVAFFSLVA QCYYTI*

Sequence ? help Back to Top

Protein Sequence Length: 537 aa Download sequence

MLSGVNVWMG DQRDDDDPPA SWPAGGKGRV NLSAPPGQRG EGGDVNSAFN SMLEVGKNDD  60
WYNNGVVASG GLHTHDAFAS DRNSLGAAAD VHSSLMLYHH HNQQHHHHSA DSCGSCSPSF  120
NYSDASQVQF YLQPKPLPSS SSLLSFMPTQ LDHSNFELGC EQSFLDSQSS SFLINLNGRG  180
SGGLFNGFSD LMNLNSNNET SSLVGSGSNL PIQSCAGAGG GVGLDLGFKG FDDVRSNGVF  240
MNRSKLLGPL DSFPSSGAQP TLFQKRAALR KNFTLQSGVV EGDKAKREAC LNEMMSKRKS  300
GSGVDEFDDV SVDGSELNYD SDEFAESYKL EENGKNGRRS SNGNRGVTVG DRKGRKKGLP  360
AKNLMAERRR RKKLNDRLYM LRSVVPKISK MDRASILGDA IEYLKELLQK INRLHDELES  420
TPAGSSLTPT TPFPSLTPTA PTLPCRIKEE LCPRSLASPN GQPAKVEVRL REGRSVNIHM  480
ICGRRPGLLQ STMRALEALG LDIQEAVISC FNGFAMDVFK AEVAFFSLVA QCYYTI*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	355	373	RKKGLPAKNLMAERRRRKK
2	367	374	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	6e-95	bHLH family protein