PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0006s0075.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 523aa MW: 56698.5 Da PI: 6.6966

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0006s0075.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.9	1.3e-11	351	393	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L Kaladp0006s0075.2.p 351 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 393 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 523 aa Download sequence
MLSGVNVWMG DQRDDDDPPA SWPAGGEGGD VNSAFNSMLE VGKNDDWYNN GVVASGGLHT 60 HDAFASDRNS LGAAADVHSS LMLYHHHNQQ HHHHSADSCG SCSPSFNYSD ASQVQFYLQP 120 KPLPSSSSLL SFMPTQLDHS NFELGCEQSF LDSQSSSFLI NLNGRGSGGL FNGFSDLMNL 180 NSNNETSSLV GSGSNLPIQS CAGAGGGVGL DLGFKGFDDV RSNGVFMNRS KLLGPLDSFP 240 SSGAQPTLFQ KRAALRKNFT LQSGVVEGDK AKREACLNEM MSKRKSGSGV DEFDDVSVDG 300 SELNYDSDEF AESYKLEENG KNGRRSSNGN RGVTVGDRKG RKKGLPAKNL MAERRRRKKL 360 NDRLYMLRSV VPKISKMDRA SILGDAIEYL KELLQKINRL HDELESTPAG SSLTPTTPFP 420 SLTPTAPTLP CRIKEELCPR SLASPNGQPA KVEVRLREGR SVNIHMICGR RPGLLQSTMR 480 ALEALGLDIQ EAVISCFNGF AMDVFKAEVA FFSLVAQCYY TI*

Sequence ? help Back to Top

Protein Sequence Length: 523 aa Download sequence

MLSGVNVWMG DQRDDDDPPA SWPAGGEGGD VNSAFNSMLE VGKNDDWYNN GVVASGGLHT  60
HDAFASDRNS LGAAADVHSS LMLYHHHNQQ HHHHSADSCG SCSPSFNYSD ASQVQFYLQP  120
KPLPSSSSLL SFMPTQLDHS NFELGCEQSF LDSQSSSFLI NLNGRGSGGL FNGFSDLMNL  180
NSNNETSSLV GSGSNLPIQS CAGAGGGVGL DLGFKGFDDV RSNGVFMNRS KLLGPLDSFP  240
SSGAQPTLFQ KRAALRKNFT LQSGVVEGDK AKREACLNEM MSKRKSGSGV DEFDDVSVDG  300
SELNYDSDEF AESYKLEENG KNGRRSSNGN RGVTVGDRKG RKKGLPAKNL MAERRRRKKL  360
NDRLYMLRSV VPKISKMDRA SILGDAIEYL KELLQKINRL HDELESTPAG SSLTPTTPFP  420
SLTPTAPTLP CRIKEELCPR SLASPNGQPA KVEVRLREGR SVNIHMICGR RPGLLQSTMR  480
ALEALGLDIQ EAVISCFNGF AMDVFKAEVA FFSLVAQCYY TI*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	341	359	RKKGLPAKNLMAERRRRKK
2	353	360	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	4e-95	bHLH family protein