PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0006s0075.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 550aa MW: 59371.4 Da PI: 6.7871 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.8 | 1.4e-11 | 365 | 407 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L Kaladp0006s0075.1.p 365 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 407 79*********************66......****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 550 aa Download sequence |
MLSGVNVWMG DQRDDDDPPA SWPAGGKGRV NLSAPPGQRG EGGDVNSAFN SMLEVGKNDD 60 WYNNGVVASG GLHTHDAFAS DRNSLGAAAD VHSSLMLYHH HNQQHHHHSA DSCGSCSPSF 120 NYSDASQVQF YLQPKPLPSS SSLLSFMPTQ LDHSNFELGC EQSFLDSQSS SFLINLNGRG 180 SGGLFNGFSD LMNLNSNNET SSLVGSGSNL PIQSCAGAGG GVGLDLGFKG FDDVRSNGVF 240 MNRSKLLGPL DSFPSSGAQP TLFQKRAALR KNFTLQSGVV EGDKAKREAC LNEMMSKRKS 300 GSGVDEFDDV SVDGSELNYD SDEFAESYKL EENGKNGRRS SNGNRGVTVG DRKGRKKGLP 360 AKNLMAERRR RKKLNDRLYM LRSVVPKISK MDRASILGDA IEYLKELLQK INRLHDELES 420 TPAGSSLTPT TPFPSLTPTA PTLPCRIKEE LCPRSLASPN GQPAKVEVRL REGRSVNIHM 480 ICGRRPGLLQ STMRALEALG LDIQEAVISC FNGFAMDVFK AEQCNEGPDV LPDHIKAMLL 540 ESAGFHGVT* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 355 | 373 | RKKGLPAKNLMAERRRRKK |
2 | 367 | 374 | ERRRRKKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G26744.1 | 1e-107 | bHLH family protein |