PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0006s0073.3.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 346aa    MW: 38033.7 Da    PI: 8.3309
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0006s0073.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.26.8e-09180227455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 
                          +h+ +Er RR+ri +++  L+ l+P +     +K   Ka +L + ++Y++sLq
  Kaladp0006s0073.3.p 180 SHSLAERVRRERISERMKMLQALVPGC-----EKvTGKALMLDEIINYVQSLQ 227
                          8*************************9.....67699***************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MAAYSYQPHH FFLSSTFFPN TPFDMSGLVN EGNISSKDSN SAIIAFANDM AASSPMGQLL  60
HEGLSDAGVI HSSKTMHSAT VSSIDVEKAE VIGEQVTQKR MSCSDHKEKN KKKTSRRGSS  120
SLNNSTQGKA KKQKKSEDGQ NVVEEQKPNK VSKKRQMDGS EDTQKDYIHV RARRGQATDS  180
HSLAERVRRE RISERMKMLQ ALVPGCEKVT GKALMLDEII NYVQSLQNQI EFLSMKLASF  240
NPIYSNFAMD LDAALLRQER LSRLLAAASQ PGGSAQQYSP TAVNYNNSST TTLSGPAVGC  300
HHHSLIETSL LLQQEAADSL SWDQMDTQTQ NLMNQFGLGN AMCTF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.28e-54bHLH family protein