PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0005s0063.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 266aa    MW: 29479.1 Da    PI: 7.3603
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0005s0063.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.34.1e-11155202455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +h+ +Er RR++i +++  L++l+P +    +k   Ka+iL + ++Y++sLq
  Kaladp0005s0063.1.p 155 SHSLAERVRREKIGERMKLLQSLVPGC----DKIAGKAQILDEIINYVQSLQ 202
                          8*************************9....899*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MSGFSYHHDH SDSSSLQSNN NFVHVPTPFQ QDDTVLWRHS NNECFQDYFP FHQFQSKEAN  60
YGLSAAAAAR HDAEVPSSAI VCGLRASYIA GPNAEMGVAQ TPKRRKNINS KKIPPKQNYE  120
KKSKGGQKEK EQVSGTPPVM EYIHVRARRG QATDSHSLAE RVRREKIGER MKLLQSLVPG  180
CDKIAGKAQI LDEIINYVQS LQTQVQVLVG KMAVLSPYMS DNEANLGAAL PASAEVRLCE  240
MDVQAGHFGA IDDQYWLDHL AQVDQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1103130KRRKNINSKKIPPKQNYEKKSKGGQKEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.22e-31bHLH family protein