PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0003s0049.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 210aa MW: 22508 Da PI: 5.7525 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.7 | 1.6e-19 | 48 | 97 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ykGVr++ +g+WvAeIr+p + r +r +lg+f+ta eAa a++aa+ kl+g Kaladp0003s0049.1.p 48 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFDTAREAALAYDAAAVKLYG 97 69****999.**********8...3.35***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MSSSYSSSSS SSSSEKLARG SPGRKPGQGT SRKGCMRGKG GPENAACTYK GVRQRTWGKW 60 VAEIREPNRG ARLWLGTFDT AREAALAYDA AAVKLYGSDA KLNLPDSVPT PAANHHSPAP 120 THNVSYNYGF ATVNNDAVSD AEKQRWAEFD FDMNVAPGAT KAEDIVDEEL WAEAAKTLEF 180 PIMEGPGIFG NQCVDNNGLE VVMLSPWCI* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75490.1 | 5e-42 | ERF family protein |