PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0002s0030.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 223aa MW: 24225.3 Da PI: 10.1491 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.9 | 3.3e-20 | 11 | 60 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr ++ +gr++AeIrdp g++ r++lg+f+tae+Aa+a++aa+++++g Kaladp0002s0030.1.p 11 RFRGVRKRP-WGRYAAEIRDP---GRKSRVWLGTFDTAEDAARAYDAAALEFRG 60 69*******.**********8...556************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MAERTAAEEV RFRGVRKRPW GRYAAEIRDP GRKSRVWLGT FDTAEDAARA YDAAALEFRG 60 SKAKTNFPQP HTPEPKSLTT PAAARLKLDK SPSQSSTVES SSPPLGLQLG PQIRPGGVEF 120 QFQPLLSPYS PRHHHLPLVG HKASIFHFDA ALGSKNQPLP SNPLPIRPKA SHVHTKPFHF 180 ESPASDSDSS SAVIDLGANE DPDVKPKRGL QGIDLNLPPT EL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 1e-24 | ERF family protein |