PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0002s0016.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ARF
Protein Properties Length: 674aa    MW: 72818.1 Da    PI: 7.4387
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0002s0016.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.72.2e-23171272199
                          EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 
                          f+k+lt sd++++g +++p++ ae++       +  ++ s++++ +d++g++W++++iyr++++r++lt+GW+ Fv+ +++ +gD v+F 
  Kaladp0002s0016.1.p 171 FCKTLTASDTSTHGGFSVPRRAAEDCfppldytQ--QRPSQEIVAKDLHGQEWRFRHIYRGQPRRHLLTTGWSAFVNMKKIASGDAVLFL 258
                          99****************************9743..345679************************************************ PP

                          E-SSSEE..EEEEE-S CS
                   B3  84 ldgrsefelvvkvfrk 99 
                          +    ++ l+++++r+
  Kaladp0002s0016.1.p 259 RG--GDGVLRLGIRRA 272
                          43..677789999986 PP
2Auxin_resp93.24.3e-31299377382
           Auxin_resp   3 haastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                          ++++  s+F+v+YnPr   s F+++v k++++l++++svG Rfkm++e+ed++errl+G+++g+sdldp +Wp+S+W++L
  Kaladp0002s0016.1.p 299 NSITAPSAFSVCYNPRGNLSPFIIPVCKFSRSLDHSLSVGVRFKMRVEGEDAAERRLTGVITGMSDLDP-KWPGSRWKCL 377
                          6788899**************************************************************.*********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 674 aa     Download sequence    
MGGFNFIDLN DVGGGEGVEE DEAAPSVATT LSSSAGSASS SSVSSASAST APLPTAGGAL  60
SSSVCLELWH ACAGRLISLP KRGSCVVYFP QGYLELLPER PSSTFNLLPH VFCRVIDVKL  120
QAEVDTDEVF ALVSLIPDSQ IEQRWRDGMI EDNGDEDGSE AAAKHITPHM FCKTLTASDT  180
STHGGFSVPR RAAEDCFPPL DYTQQRPSQE IVAKDLHGQE WRFRHIYRGQ PRRHLLTTGW  240
SAFVNMKKIA SGDAVLFLRG GDGVLRLGIR RAAQVKSVSP FPASCGQQFN LSNFSALVNS  300
ITAPSAFSVC YNPRGNLSPF IIPVCKFSRS LDHSLSVGVR FKMRVEGEDA AERRLTGVIT  360
GMSDLDPKWP GSRWKCLSVR WDGVHGNQQS SRLSPWEIEP CGSLSGCHMT SPGLKRTRSS  420
FPAANLDYPA NGVRSPEFRE PSRSQKVLQG QEIDRFSFYG MQSQHPSELM RCFPGTDRSG  480
TAMMRNGVGI AQMIPSAPFN HPGFGESFRF HKVLQGQEKY PGPTFMAPSA NLTRDSGGGF  540
GILDGVRVAS LQGAPPGLMY PPSNFHQQVN GVVNPHQAGE ISNVPATHPL HPPSPYARIF  600
GRDLMASLSH PCQALAHDQL GASRHPIMIR PAMYATNQDS AATEANASCR LFGFSLTEGA  660
RATTNGDDPI HFI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33860.11e-177ARF family protein